Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq174905 123 2e-23 >seq174905 Length=21728 Score = 123 bits (136), Expect = 2e-23 Identities = 363/557 (65%), Gaps = 3/557 (1%) Strand=Plus/Plus Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 || || ||||| ||||| ||| || || | || || | || ||||||||||| | Sbjct 14670 CAGGCGAAATCGGTATGCATTCCCTCATCTCGGCTGATGAGTTCATTTGAAAATGTTAAG 14729 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 || ||||| || || || || || ||||||||||| | || || || ||||| ||||| Sbjct 14730 CCAGGCATGAGCCCCCGCTTCTTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAGAAG 14789 Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttct 16414 || ||||| || |||||||| || || | |||||| | | || || | Sbjct 14790 ATGCCTTCGACCGCGGCAAAAGCGACTAGACGCTCAGCAAATGTGGAGCCTTCGTCAGAT 14849 Query 16415 atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTA 16474 ||||| || ||||| | || || | || | || || ||||||| || | | Sbjct 14850 ATCCACTTGAGGGCCCATTCAGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCGTCA 14909 Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534 |||| ||| | | ||| || || || || || || || || | ||| | Sbjct 14910 AATAGATACTCTCTTTGATTTGGGTCCTTGATGTAGGTGTCGATGAGAAGGGAATAGGTC 14969 Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594 |||| || | |||||||| || ||||| ||||| || || | ||||||| | | Sbjct 14970 TCTGCGTGGACGTTCTCCATCATAATTTGAAACCCATAGAAACAGCGTGCTTCGGCGACT 15029 Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654 |||||||| | | || | || | | ||||| || || || || || ||| ||| Sbjct 15030 TGTACTTCGTTGGAGAAACGTTGAACAAGATTTTCATTGACGATACCGTCAGAAGCGGCA 15089 Query 16655 AAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--TGAAAGT-TTTAACCAG 16711 || || ||||| |||||| |||||||| |||||| || | | | | || |||| Sbjct 15090 AAGAAGGCAAGGATGTGTGAAATAAAATGGCGTTCGTTGTCGTTTAGATTGTTGTTCCAG 15149 Query 16712 TCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTT 16771 || | || | |||||||| | ||||| |||||||||| || || | ||||| Sbjct 15150 TCCATTAGGTCGTGAGATAAATCCAGTTCTTCAGCAGTCCAAAATGATGCCTCCGCCTTC 15209 Query 16772 TTATACATTTTCCATAT 16788 || ||||| | ||| || Sbjct 15210 TTGTACATCTGCCAGAT 15226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461456958095400