Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq174905 154 1e-32 >seq174905 Length=21728 Score = 154 bits (170), Expect = 1e-32 Identities = 305/448 (68%), Gaps = 4/448 (1%) Strand=Plus/Plus Query 14204 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 14263 || || ||||| ||| | |||||||||| || || ||||| |||||||||||||| Sbjct 14670 CAGGCGAAATCGGTATGCATTCCCTCATCTCGGCTGATGAGTTCATTTGAAAATGTTAAG 14729 Query 14264 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 14323 || ||||| | || || || |||| ||||||||||| |||||| || || || ||||| Sbjct 14730 CCAGGCATGAGCCCCCGCTTCTTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAGAAG 14789 Query 14324 ATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT 14383 || || || || || ||||| || | || || || |||| | | || || ||| Sbjct 14790 ATGCCTTCGACCGCGGCAAAAGCGACTAGACGCTCAGCAAATGTGGAGCCTTCGTCAGAT 14849 Query 14384 ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTA 14443 ||||| || |||||||||| || || || || ||||| || || || | | Sbjct 14850 ATCCACTTGAGGGCCCATTCAGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCGTCA 14909 Query 14444 AATAAATGTTC-CTTCTCTTT-AGTACTTGAAATGTATGTATCAATAAGTAAGCTATACA 14501 |||| || || ||| ||| || |||| ||||| || || || || | | ||| Sbjct 14910 AATAGATACTCTCTTTGATTTGGGTCCTTG--ATGTAGGTGTCGATGAGAAGGGAATAGG 14967 Query 14502 TTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACC 14561 | || | ||| | ||| ||||| || ||||| ||||| ||||| | ||||| | Sbjct 14968 TCTCTGCGTGGACGTTCTCCATCATAATTTGAAACCCATAGAAACAGCGTGCTTCGGCGA 15027 Query 14562 ATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTG 14621 |||||| || | | || | || | | ||||||||| || ||||| ||| ||| | Sbjct 15028 CTTGTACTTCGTTGGAGAAACGTTGAACAAGATTTTCATTGACGATACCGTCAGAAGCGG 15087 Query 14622 CAAAAAATGCCAATATGTTTTTAATAAA 14649 |||| || || | |||| | |||||| Sbjct 15088 CAAAGAAGGCAAGGATGTGTGAAATAAA 15115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481245315422520