Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq174905 161 9e-35 seq178594 134 1e-26 seq181137 100 3e-16 >seq174905 Length=21728 Score = 161 bits (178), Expect = 9e-35 Identities = 381/569 (67%), Gaps = 21/569 (4%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| || ||||| |||||||| | |||||| | || | Sbjct 15226 ATCTGGCAGATGTACAAGAAGGCGGAGGCATCATTTTGGACTGCTGAAGAACTGGATTTA 15167 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 ||| | || || | || ||| | | || || || || | |||||||| | Sbjct 15166 TCTCACGACCTAATGGACTGGAACAACAATCTAAACGACAACGAACGCCATTTTATTTCA 15107 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||| | | || || || ||||| || || ||||| || || || ||| | || || | Sbjct 15106 CACATCCTTGCCTTCTTTGCCGCTTCTGACGGTATCGTCAATGAAAATCTTGTTCAACGT 15047 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || | ||||| ||||| | || || | || || || || |||||| | || Sbjct 15046 TTCTCCAACGAAGTACAAGTCGCCGAAGCACGCTGTTTCTATGGGTTTCAAATTATGATG 14987 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGAC----AA 57862 || ||||| || |||| | ||||| || |||||||| || ||| | |||||| | Sbjct 14986 GAGAACGTCCACGCAGAGACCTATTCCCTTCTCATCGACACCTACATCAAGGACCCAAAT 14927 Query 57863 CGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AA 57919 | | |||| ||| || || |||| || || ||||| || ||| ||| || Sbjct 14926 CAAAGAGA---GTAT-CTATTTGACGCCATAGAGACAATTCCTTGCATC---AAGCGCAA 14874 Query 57920 GGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGC--CACGTTCGCCGAGAGGCTA 57977 ||| || ||| | |||| |||||| || | ||| ||| || || ||| | ||| Sbjct 14873 GGCTGAATGGGCCCTCAAGTGGATATCTGACG--AAGGCTCCACATTTGCTGAGCGTCTA 14816 Query 57978 ATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGG 58037 |||| || ||||| |||||||| || ||||| || ||| || || ||||||||||| Sbjct 14815 GTCGCTTTTGCCGCGGTCGAAGGCATCTTCTTCTCTGGCTCGTTCGCTTCAATATTTTGG 14756 Query 58038 ATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGAC 58097 || ||||| || || || ||||| ||| | || ||| || || | || || || Sbjct 14755 ATAAAGAAGCGGGGGCTCATGCCTGGCTTAACATTTTCAAATGAACTCATCAGCCGAGAT 14696 Query 58098 GAGGGTCTCCATACTGATTTTGCGTGCCT 58126 ||||| | ||||| ||||| || ||||| Sbjct 14695 GAGGGAATGCATACCGATTTCGCCTGCCT 14667 Score = 136 bits (150), Expect = 4e-27 Identities = 374/567 (66%), Gaps = 17/567 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| || || || || ||||| ||||| | ||||| | || || Sbjct 16305 ATCTGGCAGATGTACAAGAAAGCGGAGGCGTCGTTCTGGACAGCTGAAGAGATGGATCTC 16364 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTC---AAAGAATCTGAGAGAAATTTTATTAAA 57686 || |||||||| || ||| | || | || || ||| | | || ||| | Sbjct 16365 TCGAAGGATCTTCATGACTGGAACAACCGCCTGAACGACAACGAGCGCCACTTCATTTCA 16424 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || ||||| || || || ||||| || || || || | ||||| | Sbjct 16425 CACGTTCTCGCTTTCTTCGCGGCGTCTGACGGTATCGTCAATGAAAACCTTCTCGAACGC 16484 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || ||||| |||| | ||||| | ||||| || || || || | || Sbjct 16485 TTCTCCGGTGAAGTACAAGCCGCCGAGGCTCGTTGCTTCTATGGCTTCCAGATTATGATG 16544 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG-- 57864 |||||| | || || |||| || || || |||||||| |||||| | || || || Sbjct 16545 GAAAACATCCACTCCGAAACCTACTCTCTCCTCATCGACACGTACATCAAAGAGCCCGCT 16604 Query 57865 --ACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGC 57922 ||| || | | |||||| |||| | ||||| || ||| ||| ||||| Sbjct 16605 CAACGCGA--CTTC--CTGTTCGACGCTGTTGAAACCATTCCCTGCATCAAACGCAAGGC 16660 Query 57923 AGAGTGGTCAATCAAATGGATAAAAAGCG-CCACGG--CCACGTTCGCCGAGAGGCTAAT 57979 || ||| | |||| ||||| || ||| | |||| |||| || | || | Sbjct 16661 TGACTGGGCCCTCAAGTGGATCTC---CGACCAGAGTTCCACTTTCGGTGAACGCCTTGT 16717 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGAT 58039 ||| || |||||||| || || || |||||||| || || || | || || ||||| Sbjct 16718 CGCCTTTGCCGCCGTTGAGGGGATTTTCTTTTCTGGGTCGTTCGCATCCATCTTCTGGAT 16777 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 |||||| || || ||||||||||| |||| || ||||||| | || ||||| || Sbjct 16778 GAAGAAGCGTGGAATGATGCCCGGCTTGACCTTCTCCAACGAGCTCATCAGTCGCGATGA 16837 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCT 58126 |||| | || || || || || ||||| Sbjct 16838 GGGTATGCACACCGACTTCGCCTGCCT 16864 >seq178594 Length=29560 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416 |||||||| || ||||| || ||||| |||| || || ||||| |||||| |||||| Sbjct 5390 AAAAGATCAGGAATCCACAGTGCGTAAAACAAATCACGAGCGCGAGACTCCTCCTTGCCG 5449 Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476 |||||| ||| ||| | || || || || ||||||||||| ||||||||||| | | Sbjct 5450 TGGTTCTTCCTCAGATCGAGGAACTCGAAAACATCCGCATGCCATGGCTCGAGGTAGATG 5509 Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536 || || || || || | ||| ||||| || ||||| || ||||| || ||| | || Sbjct 5510 GCGAAAGCTCCGGGACGCTTGTTGCCACCTTGATCAACATAACGAGCGGTGGCATCATAG 5569 Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGA 23565 ||| ||||| || |||| |||||||| Sbjct 5570 GCTCGGAGCATAGGAACGATTCCGTTGGA 5598 >seq181137 Length=58212 Score = 100 bits (110), Expect = 3e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| |||||||| | || || || | || Sbjct 1613 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGCTGGAGGTGGAGTCTTCG 1554 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || ||||||||||||| | || || || ||| Sbjct 1553 GACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 1494 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || ||||| || || |||||||| || | || | |||||||| Sbjct 1493 CAACGTCTCATCTTCGCCGGGAAGCAGTTGGAGGATGGTCGTACCCTTTCGGATTATAAT 1434 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGG 31400 || || || || |||||||||||| ||| Sbjct 1433 ATCCAGAAGGAGTCGACTCTTCATTTGG 1406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444749556692880