Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq174905 89.7 1e-12 seq178594 87.8 4e-12 >seq174905 Length=21728 Score = 89.7 bits (98), Expect = 1e-12 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||| |||||||| || ||||| || || |||||| ||| | ||||||||||| |||| Sbjct 16714 TTGTCGCCTTTGCCGCCGTTGAGGGGATTTTCTTTTCTGGGTCGTTCGCATCCATCTTCT 16773 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 |||| ||||| | || || |||| || | |||| |||||| ||| |||| | | | Sbjct 16774 GGATGAAGAAGCGTGGAATGATGCCCGGCTTGACCTTCTCCAACGAGCTCATCAGTCGCG 16833 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 | || ||| | || |||||| || ||| | |||| Sbjct 16834 ATGAGGGTATGCACACCGACTTCGCCTGCCTTTTGTT 16870 >seq178594 Length=29560 Score = 87.8 bits (96), Expect = 4e-12 Identities = 174/255 (68%), Gaps = 2/255 (1%) Strand=Plus/Plus Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTC-CTTAAGAGTATCATAAATACC 94844 |||| || || ||||||||| || || || || | ||| |||||||| || ||||| Sbjct 5710 CCGATACCACCGGCAGTCTTGCTAATCATGGC-GCAGCTCTTGAGAGTATCGTAGATACC 5768 Query 94845 CTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGT 94904 || ||| ||||| | | || | |||||||| || || ||||| || | ||| Sbjct 5769 ATCGATGGAGTCATCCTTCATGCAGACTAGGAAGCAGGAAGAGAGTTGCGGATGGGGTGT 5828 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 ||| || ||||| || || || || || || || || | |||||||| | || Sbjct 5829 ACCAGCGTTGAACAGGGTAGGCGAGGCGTGTGTGAAGTAACGTTCTGACATGAGGTTGTA 5888 Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024 || |||| |||| | ||| || ||||| || || || ||||||||||| ||||| Sbjct 5889 GGTCTCAAGGACATGGTCGATATCATCGCCGTGGATACCAACGGCCACACGCATGATCAT 5948 Query 95025 GTCCTGAGGGCGCTC 95039 | |||||||| || Sbjct 5949 ATGTTGAGGGCGTTC 5963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 987270213756995