Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq174905 131 2e-25 >seq174905 Length=21728 Score = 131 bits (144), Expect = 2e-25 Identities = 366/558 (66%), Gaps = 8/558 (1%) Strand=Plus/Plus Query 11630 CACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAAT 11689 || || ||||| ||| | || || |||| || || |||||||| ||||||||||| Sbjct 14670 CAGGCGAAATCGGTATGCATTCCCTCATCTCGGCTGATGAGTTCATTTGAAAATGTTAAG 14729 Query 11690 CCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAAT 11749 || ||||| | || || || |||||||||||||| | ||| || || ||||| ||||| Sbjct 14730 CCAGGCATGAGCCCCCGCTTCTTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAGAAG 14789 Query 11750 ATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATAT----ACCTTGTTGCTAGA 11805 || || || || || ||||| || |||| | || || || | | | | | ||| Sbjct 14790 ATGCCTTCGACCGCGGCAAAAGCGACTAGACGCTCAGCAAATGTGGAGCCT-TCGTCAGA 14848 Query 11806 TATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTT 11865 |||||| || |||||| ||||| || || | ||| ||||| ||||| |||| Sbjct 14849 TATCCACTTGAGGGCCCATTCAGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCGTC 14908 Query 11866 AAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACAT 11925 ||||| || | | ||| | || | | || || || || | | ||| | Sbjct 14909 AAATAGATACTCTCTTTGATTTGGGTCCTTGATGTAGGTGTCGATGAGAAGGGAATAGGT 14968 Query 11926 TTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACA 11985 |||| || | || ||||| |||||||| ||||||||||| ||||| || | Sbjct 14969 CTCTGCGTGGACGTTCTCCATCATAATTTGAAACCCATAGAAACAGCGTGCTTCGGCGAC 15028 Query 11986 CTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGC 12045 ||||| || | || | || | | ||| ||||| || ||||| ||| || || Sbjct 15029 TTGTACTTCGTTGGAGAAACGTTGAACAAGATTTTCATTGACGATACCGTCAGAAGCGGC 15088 Query 12046 AAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTA-AT--TTATCCCA 12102 ||| || || || || ||| ||||| | ||||| | ||| || || | ||| Sbjct 15089 AAAGAAGGCAAGGATGTGTGAAATAAAATGGCGTTCGTTGTCGTTTAGATTGTTGTTCCA 15148 Query 12103 ATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTG 12162 || || || | |||||||| | ||||||| | |||||||| |||| | | | Sbjct 15149 GTCCATTAGGTCGTGAGATAAATCCAGTTCTTCAGCAGTCCAAAATGATGCCTCCGCCTT 15208 Query 12163 TTTATACATTTTCCAGAT 12180 || ||||| | |||||| Sbjct 15209 CTTGTACATCTGCCAGAT 15226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 467456042222160