Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq173931 95.1 1e-14 seq181137 86.0 6e-12 >seq173931 Length=6298 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | |||||| || | ||| | |||||||| || || ||||| || ||||| Sbjct 5734 CCACCACGAAGACGCAACACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTG 5675 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||||||||| || |||||| |||||||||||||||||||||| || Sbjct 5674 AGAGTGCGACCATCTTCGAGCTGCTTTCCAGCAAAGATCAGACGTTGCTGATCGGGGGGG 5615 Query 139658 AT 139659 || Sbjct 5614 AT 5613 >seq181137 Length=58212 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || |||||||| |||||||| ||||| | |||| ||||||||||| || || Sbjct 1645 GTCGACTCTTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCGAGCTGCTTGCCG 1704 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| |||||||| || || || || ||||| || || || ||| || || Sbjct 1705 GCGAAGATAAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTCGCCTTC 1764 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | ||||| | || ||||||||| | ||| | |||||| || || | || Sbjct 1765 ACATTATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATCGTCTTCCCTGTGAGGGTC 1824 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| || ||||| Sbjct 1825 TTGACGAAGATCTGCAT 1841 Score = 82.4 bits (90), Expect = 8e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| |||||||| || || ||||| || ||| | || | |||||||||||| Sbjct 1867 TGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGATAAGGTACGGCCGTCTTCGAGCTGC 1926 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || || ||| |||| ||||| ||||| || || || || || || ||||| ||| | || Sbjct 1927 TTCCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTC-TTGAATCTT 1985 Query 139682 TG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 || ||| | | || | || || | | ||||||||||| || | |||||||| || Sbjct 1986 TGCTTTCACGTTGTCAATGGTATCCGAAGACTCCACCTCAAGAGTGATGGTCTTGCCCGT 2045 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 | || || || || || ||||| Sbjct 2046 GAGGGTCTTAACAAAGATCTGCAT 2069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494932422208800