Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq174905 230 3e-55 seq178594 111 2e-19 seq175565 95.1 2e-14 >seq174905 Length=21728 Score = 230 bits (254), Expect = 3e-55 Identities = 386/557 (69%), Gaps = 6/557 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||||||| |||| ||||| |||| || || ||||| || ||||| || | Sbjct 14670 CAGGCGAAATCGGTATGCATTCCCTCATCTCGGCTGATGAGTTCATTTGAAAATGTTAAG 14729 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || ||||| || || ||||| || | ||||||||| || || || || ||||| |||||| Sbjct 14730 CCAGGCATGAGCCCCCGCTTCTTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAGAAG 14789 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT---GTCATGT 50136 || ||||| || |||||||| || || || | ||| || | ||| || |||| | Sbjct 14790 ATGCCTTCGACCGCGGCAAAAGCGACTAGACGCTCAGCAAATGTGGAGCCTTCGTCAGAT 14849 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 |||||||| | ||||| || ||||| || | ||||| || || |||||||| | | Sbjct 14850 ATCCACTTGAGGGCCCATTCAGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCGTCA 14909 Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256 || ||||| | | ||| ||| || || | || || ||||| | ||| ||| | Sbjct 14910 AATAGATACTCTCTTTGATTTGGGTCCTTGATGTAGGTGTCGATGAGAAGGGAATAGGTC 14969 Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316 || | || | ||| || || || ||||| || |||||||| | || |||| | Sbjct 14970 TCTGCGTGGACGTTCTCCATCATAATTTGAAACCCATAGAAACAGCGTGCTTCGGCGACT 15029 Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376 || ||||| | | || |||| | | | ||||||||| || || |||||| || ||| Sbjct 15030 TGTACTTCGTTGGAGAAACGTTGAACAAGATTTTCATTGACGATACCGTCAGAAGCGGCA 15089 Query 50377 AAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATT---CCAA 50433 || || || | | ||| |||||||| ||||||| |||| || || ||| Sbjct 15090 AAGAAGGCAAGGATGTGTGAAATAAAATGGCGTTCGTTGTCGTTTAGATTGTTGTTCCAG 15149 Query 50434 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493 || | | || | ||||| ||| | |||||| | ||||||||||||||||| ||||| Sbjct 15150 TCCATTAGGTCGTGAGATAAATCCAGTTCTTCAGCAGTCCAAAATGATGCCTCCGCCTTC 15209 Query 50494 TTATACATATTCCAGAT 50510 || ||||| | |||||| Sbjct 15210 TTGTACATCTGCCAGAT 15226 Score = 172 bits (190), Expect = 8e-38 Identities = 373/557 (67%), Gaps = 6/557 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| ||| ||||| |||||| || | ||| || || |||||||| || || | Sbjct 16861 CAGGCGAAGTCGGTGTGCATACCCTCATCGCGACTGATGAGCTCGTTGGAGAAGGTCAAG 16802 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| | |||||||| || | ||| || ||||| || || |||||||||||||| Sbjct 16801 CCGGGCATCATTCCACGCTTCTTCATCCAGAAGATGGATGCGAACGACCCAGAAAAGAAA 16742 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT---GTCATGT 50136 || || || || ||||||||||| ||||| | || || || ||| || ||| Sbjct 16741 ATCCCCTCAACGGCGGCAAAGGCGACAAGGCGTTCACCGAAAGTGGAACTCTGGTCGGAG 16682 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 |||||||| | ||||| || ||||| ||| | || || || ||||| | || | Sbjct 16681 ATCCACTTGAGGGCCCAGTCAGCCTTGCGTTTGATGCAGGGAATGGTTTCAACAGCGTCG 16622 Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256 || || ||| || | ||||| | || || ||||| | ||| || || Sbjct 16621 AACAGGAAGTCGCGTTGAGCGGGCTCTTTGATGTACGTGTCGATGAGGAGAGAGTAGGTT 16562 Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316 || || || |||||||| || ||||| || || ||||| || | |||||||| Sbjct 16561 TCGGAGTGGATGTTTTCCATCATAATCTGGAAGCCATAGAAGCAACGAGCCTCGGCGGCT 16502 Query 50317 TGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 50376 || ||||| | || ||||| | |||||||| || || |||||| || || Sbjct 16501 TGTACTTCACCGGAGAAGCGTTCGAGAAGGTTTTCATTGACGATACCGTCAGACGCCGCG 16442 Query 50377 AAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTCCAA 50433 || || || | || ||| || || || |||||| | | | || ||||| Sbjct 16441 AAGAAAGCGAGAACGTGTGAAATGAAGTGGCGCTCGTTGTCGTTCAGGCGGTTGTTCCAG 16382 Query 50434 TCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 50493 |||| | ||| || || | ||| | ||||| ||||||| || || ||||| || || Sbjct 16381 TCATGAAGATCCTTCGAGAGATCCATCTCTTCAGCTGTCCAGAACGACGCCTCCGCTTTC 16322 Query 50494 TTATACATATTCCAGAT 50510 || ||||| | |||||| Sbjct 16321 TTGTACATCTGCCAGAT 16305 >seq178594 Length=29560 Score = 111 bits (122), Expect = 2e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 79951 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 80010 || |||||||||||||| || || ||| | ||| | | | | |||||| || || Sbjct 5390 AAAAGATCAGGAATCCACAGTGCGTAAAACAAATCACGAGCGCGAGACTCCTCCTTGCCG 5449 Query 80011 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 80070 ||||| | |||||||||||| | | || ||| | |||||| || || | ||| ||| Sbjct 5450 TGGTTCTTCCTCAGATCGAGGAACTCGAAAACATCCGCATGCCATGGCTCGAGGTAGATG 5509 Query 80071 GCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 80130 || | | |||| || || ||||| || || ||||| | || | ||||||| || ||| Sbjct 5510 GCGAAAGCTCCGGGACGCTTGTTGCCACCTTGATCAACATAACGAGCGGTGGCATCATAG 5569 Query 80131 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAG 80184 ||| | ||| |||| || || ||||| |||||||||||||| || ||| Sbjct 5570 GCTCGGAGCATAGGAACGATTCCGTTGGAATAACCATTGGTCCCGGCAATGTAG 5623 >seq175565 Length=26152 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| | ||| ||||| || ||| | || |||||||| || || || ||||||||| Sbjct 8115 AACACGAGACAGGCGAAGTCAGTGTGTATCCCTTCGTCTCTGCTGATAAGCTCGTTGGAA 8174 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 |||||||| ||||||| ||| | ||| || |||||| ||||||| ||||| || | Sbjct 8175 AACGTGAGGCCGGGCAAAAGGTTCCTCTTCTTGAGCCAATATATGGAGGCAAACGAGCTC 8234 Query 50071 GAAAAGAAGATTCCTTCTAC 50090 || ||| ||||||||| || Sbjct 8235 GAGAAGTGGATTCCTTCGAC 8254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716630348061960