Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq174905 149 6e-31 >seq174905 Length=21728 Score = 149 bits (164), Expect = 6e-31 Identities = 351/526 (67%), Gaps = 7/526 (1%) Strand=Plus/Plus Query 13660 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13719 || || ||||| ||| | |||||||||| || || ||||| |||||||||||||| Sbjct 14670 CAGGCGAAATCGGTATGCATTCCCTCATCTCGGCTGATGAGTTCATTTGAAAATGTTAAG 14729 Query 13720 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 13779 || ||||| | || || || |||| ||||||||||| |||||| || || || ||||| Sbjct 14730 CCAGGCATGAGCCCCCGCTTCTTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAGAAG 14789 Query 13780 ATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGAT 13839 || || || || || ||||| || | ||| || || |||| | | || || ||| Sbjct 14790 ATGCCTTCGACCGCGGCAAAAGCGACTAGACGCTCAGCAAATGTGGAGCCTTCGTCAGAT 14849 Query 13840 ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTG 13899 ||||| || |||||||||| || || || || ||||| || || || | Sbjct 14850 ATCCACTTGAGGGCCCATTCAGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCGTCA 14909 Query 13900 AATAAATGTTC-CTTCTCTTT-AGTACTTGAAATGTATGTATCAATAAGTAAGCTATACA 13957 |||| || || ||| ||| || |||| ||||| || || || || | | ||| Sbjct 14910 AATAGATACTCTCTTTGATTTGGGTCCTTG--ATGTAGGTGTCGATGAGAAGGGAATAGG 14967 Query 13958 TTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACC 14017 | || | ||| | ||| || || || ||||| ||||| ||||| | ||||| | Sbjct 14968 TCTCTGCGTGGACGTTCTCCATCATAATTTGAAACCCATAGAAACAGCGTGCTTCGGCGA 15027 Query 14018 ATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTG 14077 |||||| || | | || | || | | |||||||| || ||||| ||| ||| | Sbjct 15028 CTTGTACTTCGTTGGAGAAACGTTGAACAAGATTTTCATTGACGATACCGTCAGAAGCGG 15087 Query 14078 CAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAG---TTTTTTCC 14134 |||| || || | |||| | |||||| | | || | | ||| || || |||| Sbjct 15088 CAAAGAAGGCAAGGATGTGTGAAATAAAATGGCGTTCGTTGTCGTTTAGATTGTTGTTCC 15147 Query 14135 AATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14180 | || || || | ||| | ||| | ||| ||| | |||||||| Sbjct 15148 AGTCCATTAGGTCGTGAGATAAATCCAGTTCTTCAGCAGTCCAAAA 15193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477497085105960