Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq174905 93.3 6e-14 >seq174905 Length=21728 Score = 93.3 bits (102), Expect = 6e-14 Identities = 129/175 (74%), Gaps = 8/175 (5%) Strand=Plus/Plus Query 125685 CTACCGGTCAGCATGATTGGCATGAACTGC-AAGCTAATGTGCGAGTACATAGAGTTTGT 125743 || || |||||| | || |||||||| ||| ||||| |||||| ||||||| ||||| || Sbjct 17012 CTTCCCGTCAGCCTCATCGGCATGAA-TGCTAAGCTCATGTGCCAGTACATCGAGTTCGT 17070 Query 125744 GGCAGATCGTCTACT-GTACGAGTTG--ATTGGCCGCAAGATTTACAACGCCAAGAATCC 125800 || || ||||| || ||| | | | || | ||| | |||||| ||| || || Sbjct 17071 TGCCGACCGTCTGCTTGTATCTCTGGGCAATGAC---AAGGTCTACAACTCCACCAACCC 17127 Query 125801 CTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAG 125855 ||| || |||||| || || || || |||| ||||||||||| ||||||||| Sbjct 17128 CTTCGACTTCATGGACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAG 17182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739368760595640