Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq174905 136 3e-27 >seq174905 Length=21728 Score = 136 bits (150), Expect = 3e-27 Identities = 359/543 (66%), Gaps = 5/543 (1%) Strand=Plus/Plus Query 13166 TGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCT 13225 |||| ||| ||||||| || || || || ||||||||||||| || ||||| ||||| Sbjct 14685 TGCATTCCCTCATCTCGGCTGATGAGTTCATTTGAAAATGTTAAGCCAGGCATGAGCCCC 14744 Query 13226 CGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCT 13285 || || || ||||||||||| | ||| ||||| || || || || || ||||| || || Sbjct 14745 CGCTTCTTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAGAAGATGCCTTCGACCGCG 14804 Query 13286 GCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTC-TCTATCCACTTTCTGGC 13344 ||||| || | | | ||| || | || | || || ||||||||| ||| Sbjct 14805 GCAAAAGCGACTAGACGCTCAGCAAATGT-GGAGCCTTCGTCAGATATCCACTTGAGGGC 14863 Query 13345 CCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAATAAttttt 13404 ||| | || || | || | ||| || | ||||| |||| ||||| ||| | | | Sbjct 14864 CCATTCAGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCGTCAAATAGATACTCTCT 14923 Query 13405 ttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATT 13464 || || ||| || || || || || | | | ||| | |||| || | || Sbjct 14924 TTGATTTGGGTCCTTGATGTAGGTGTCGATGAGAAGGGAATAGGTCTCTGCGTGGACGTT 14983 Query 13465 TTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTA 13524 |||||| ||||| || ||||| ||||| | || || | || || |||||| | | Sbjct 14984 CTCCATCATAATTTGAAACCCATAGAAACAGCGTGCTTCGGCGACTTGTACTTCGTTGGA 15043 Query 13525 AAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTAT 13584 || | || | | ||||| || || || |||||| ||| ||||| || ||||| || Sbjct 15044 GAAACGTTGAACAAGATTTTCATTGACGATACCGTCAGAAGCGGCAAAGAAGGCAAGGAT 15103 Query 13585 GTGCTTAATAAAttttttttCGTTTTC--TGACA-ACTTTAACCAATCTGGAAAATCTTT 13641 ||| |||||| | |||||| || | | | || ||| || | || | Sbjct 15104 GTGTGAAATAAAATGGCGTTCGTTGTCGTTTAGATTGTTGTTCCAGTCCATTAGGTCGTG 15163 Query 13642 TGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCA 13701 |||||||| | || ||| | |||||||| || || | |||||||| |||||| ||| Sbjct 15164 AGATAAATCCAGTTCTTCAGCAGTCCAAAATGATGCCTCCGCCTTCTTGTACATCTGCCA 15223 Query 13702 TAT 13704 || Sbjct 15224 GAT 15226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430023858643578