Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq181137 125 2e-23 >seq181137 Length=58212 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | ||||| || ||||| || || ||||| |||| || | |||||| Sbjct 1858 AGGACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGATAAGGTACGGCCGTCT 1917 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || || ||||| || || | ||| || || || || || || || || || Sbjct 1918 TCGAGCTGCTTCCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCT 1977 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||||||||| || || || | |||||| || || ||||| || || || ||| Sbjct 1978 TGAATCTTTGCTTTCACGTTGTCAATGGTATCCGAAGACTCCACCTCAAGAGTGATGGTC 2037 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || ||||| |||||||| Sbjct 2038 TTGCCCGTGAGGGTCTTAACAAAGATCTGCAT 2069 Score = 113 bits (124), Expect = 1e-19 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || | ||| || ||||| | || || ||||||||||| || || ||| Sbjct 1612 ATTCCACCACGCAGACGAAGGACGAGATGGAGAGTCGACTCTTTCTGAATGTTGTAATCA 1671 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || ||||| || || || || || || || || | ||||| || || Sbjct 1672 GAAAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATAAGACGTTGTTGGTCTGGG 1731 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || |||||||| ||||| || || ||||| || | ||| || | || Sbjct 1732 GGGATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTATCGATGGTGTCAGAGGACTCC 1791 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| || || || || || || || |||||||| Sbjct 1792 ACCTCGAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 1841 Score = 105 bits (116), Expect = 2e-17 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| |||||||| || || || || | ||| || || | || || || Sbjct 1417 GTCGACTCCTTCTGGATATTATAATCCGAAAGGGTACGACCATCCTCCAACTGCTTCCCG 1476 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | || ||||||||||| || ||||| || ||||| ||||| || || Sbjct 1477 GCGAAGATGAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTC 1536 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| || || || ||||| || || || ||||| || || || || Sbjct 1537 ACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATCGTCTTGCCCGTGAGGGTC 1596 Query 104543 TTTACAAATATCTGCATT 104560 || || || ||||||||| Sbjct 1597 TTGACGAAGATCTGCATT 1614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1148706268985212