Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq181137 98.7 9e-16 >seq181137 Length=58212 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/210 (71%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 94800 CCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTC 94857 |||| || | ||| || ||||| || | |||||||| | || || || |||||| Sbjct 1406 CCAAATGAAGAGTCGACTCCTTCTGGATATTATAATCCG--AAAGGGTACGACCATCCTC 1463 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || ||| || ||| | ||||| | | ||||||||| |||||||| ||||| ||||| | Sbjct 1464 CAACTGCTTCCCGGCGAAGATGAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTG 1523 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || ||||| ||| | ||| ||||| | || || || | |||||| || || Sbjct 1524 GATCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATCGTCTT 1583 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||||||||| Sbjct 1584 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 1613 Score = 89.7 bits (98), Expect = 5e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || ||||| || ||| ||||||| | | ||||| ||||| |||||||| || ||| Sbjct 1915 TCTTCGAGCTGCTTCCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTG 1974 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| ||||| || ||| | | | || || | || || |||| |||||| Sbjct 1975 TCTTGAATCTTTGCTTTCACGTTGTCAATGGTATCCGAAGACTCCACCTCAAGAGTGATG 2034 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || || || || || |||||||||||||||| Sbjct 2035 GTCTTGCCCGTGAGGGTCTTAACAAAGATCTGCATGC 2071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447268597340040