Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq175168 114 2e-20 >seq175168 Length=26499 Score = 114 bits (126), Expect = 2e-20 Identities = 243/360 (68%), Gaps = 2/360 (1%) Strand=Plus/Plus Query 193647 GAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGTAT 193706 |||||||| ||||||||||| ||| ||| || || ||||| || |||||| |||||||| Sbjct 11155 GAGATCTACAATCTTGGTGCCCAATCTCACGTCAAGGTTTCATTCGAGATGGCAGAGTAT 11214 Query 193707 ACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGA 193766 || | ||||| | | | || || ||| || | || || ||| | || | | || Sbjct 11215 ACCGGAGACGTTGACGGTCTCGGTACACTTCGACTCCTGGATGCAATCCGAACCTGCGGG 11274 Query 193767 ATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTA 193826 |||| ||| | || ||| | |||||||| ||||| ||| || || || || | Sbjct 11275 CTGGAAAAACACGTCCGCTTTTATCAGGCTTCTACATCCGAGCTATACGGCAAAGTCATG 11334 Query 193827 GGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAG 193886 | ||||| | ||||| || || ||| | || || || || |||||| || ||| Sbjct 11335 GAAACTCCTCAGAGTGAAACAACGCCGTTTTACCCGCGATCGCCATATGGTTGTGCGAAG 11394 Query 193887 TTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCT 193946 | || | |||||||| | |||||| | ||| | ||||| | |||| || Sbjct 11395 CTATACGCATATTGGATTGTGGTCAATTATAGGGAGGCGTATGGCGTGTACGCGTGTAAC 11454 Query 193947 GGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAG-ACATTTGTAACTCGTAAGAT 194005 || || | ||||| |||||| ||||| ||||| ||| ||||| || || | ||||| Sbjct 11455 GGGATCTTGTTCAACCACGAAAGCCCAAGGAGAGG-GAGAACATTCGTGACAAGGAAGAT 11513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 805713075738840