Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq174905 125 2e-23 seq178594 113 1e-19 >seq174905 Length=21728 Score = 125 bits (138), Expect = 2e-23 Identities = 317/474 (67%), Gaps = 11/474 (2%) Strand=Plus/Minus Query 22186 GAAAACGAACAACATTTTATCAAATATATTCTAGCATTCTTTGCTACCGCAGACGGTATA 22245 || ||||||| |||||||| | | || || || |||||||| | | |||||||| Sbjct 15130 GACAACGAACGCCATTTTATTTCACACATCCTTGCCTTCTTTGCCGCTTCTGACGGTATC 15071 Query 22246 GTTTTTGAGAATCTAGTGACTAATTT-TGCATCTGAAATTCAATACCCAGAGGCCAGATG 22304 || ||| ||||| || ||| | || | ||| | ||| | | || || | || Sbjct 15070 GTCAATGAAAATCTTGTTCAACGTTTCTCCAAC-GAAGTACAAGTCGCCGAAGCACGCTG 15012 Query 22305 TTTCTATGGTGTGCAAATGATGATTGAAAATGTTCACGCGGAAACATATTC---TATGAT 22361 ||||||||| | ||||| ||||| || || || ||||| || || ||||| | | || Sbjct 15011 TTTCTATGGGTTTCAAATTATGATGGAGAACGTCCACGCAGAGACCTATTCCCTTCTCAT 14952 Query 22362 GCTACAGTCACTCGTAGAAGATAAAGACGAACAACGAAACTTATTCCGCGCGATTCGCAC 22421 | ||| || || | ||| | || | | | || ||| ||| || || Sbjct 14951 -CGACACCTACATCAAGGACCCAAAT-CAAAGAGAGTATCT-ATTTGACGCCATAGAGAC 14895 Query 22422 CATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGTTC 22481 |||| | || ||| ||||| || ||||| || || ||||| | ||| | || Sbjct 14894 AATTCCTTGCATCAAGCGCAAGGCTGAATGGGCCCTCAAGTGGATATCTGACGAAGGCTC 14835 Query 22482 ---ATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGC 22538 ||| || || ||||| | || ||||| | ||| |||||||| ||||| ||||| | Sbjct 14834 CACATTTGCTGAGCGTCTAGTCGCTTTTGCCGCGGTCGAAGGCATCTTCTTCTCTGGCTC 14775 Query 22539 ATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAA 22598 || | |||| |||||| |||| || || | | ||||| || |||| |||||||| Sbjct 14774 GTTCGCTTCAATATTTTGGATAAAGAAGCGGGGGCTCATGCCTGGCTTAACATTTTCAAA 14715 Query 22599 TGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATA 22652 ||| | || |||||||||||||| | ||||||||||| || || | ||||| Sbjct 14714 TGAACTCATCAGCCGAGATGAGGGAATGCATACCGATTTCGCCTGCCTCCTATA 14661 Score = 87.8 bits (96), Expect = 5e-12 Identities = 245/373 (66%), Gaps = 11/373 (3%) Strand=Plus/Plus Query 22278 TGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGT 22337 |||| | ||| | | ||||| | || |||||||| | || || ||||| ||||| | Sbjct 16493 TGAAGTACAAGCCGCCGAGGCTCGTTGCTTCTATGGCTTCCAGATTATGATGGAAAACAT 16552 Query 22338 TCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGAC-GAACAAC 22396 ||| | ||||| || ||| | | || || |||| | | | || | | |||| Sbjct 16553 CCACTCCGAAACCTACTCTCTCCT----CATCGACACGTACATCAAAGAGCCCGCTCAAC 16608 Query 22397 GAAACTTA---TTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGG 22453 | |||| ||| ||| || ||||||| | || || ||||| || |||| Sbjct 16609 GCGACTTCCTGTTCGACGCTGTTGAAACCATTCCCTGCATCAAACGCAAGGCTGACTGGG 16668 Query 22454 CGCTGAAATGGATGAACAATGAACGTTCA---TTCGCGGAACGTCTTATTGCATTTGCTG 22510 | || || ||||| | | | |||| |||| ||||| ||| | || ||||| | Sbjct 16669 CCCTCAAGTGGATCTCCGACCAGAGTTCCACTTTCGGTGAACGCCTTGTCGCCTTTGCCG 16728 Query 22511 TGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTG 22570 ||||| || |||||||||||||| | || | ||||| ||| | || || |||| Sbjct 16729 CCGTTGAGGGGATTTTCTTTTCTGGGTCGTTCGCATCCATCTTCTGGATGAAGAAGCGTG 16788 Query 22571 CAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATA 22630 ||| ||||| || | || || || || ||| | || || || ||||||||| | || | Sbjct 16789 GAATGATGCCCGGCTTGACCTTCTCCAACGAGCTCATCAGTCGCGATGAGGGTATGCACA 16848 Query 22631 CCGATTTTGCGTG 22643 |||| || || || Sbjct 16849 CCGACTTCGCCTG 16861 >seq178594 Length=29560 Score = 113 bits (124), Expect = 1e-19 Identities = 245/367 (67%), Gaps = 0/367 (0%) Strand=Plus/Minus Query 364194 CAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253 ||| |||||||||||| |||| ||||| || || ||| || ||||||||||| || Sbjct 5046 CAAATCCAACCAGCAGAACCTGGGTACTATCAAGTCATCCAATCTCTGTACCGAGATCAT 4987 Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313 ||||||| || | || || ||||||||||| || |||||||| || |||| || || | Sbjct 4986 TGAATACTCCTCCCCGGAGGAGACTGCCGTGTGCAACCTTGCCTCTCTCGCTCTGCCTAC 4927 Query 364314 GTTTGTAAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTAC 364373 ||| | || || | | ||| ||| | || | || || | | | | Sbjct 4926 CTTTATCGTTGACGGCAAGTACGACTTCCAAAAACTCCACGATGTTTGCAAGGTCGTAGC 4867 Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTC 364433 | ||| || || | |||||| ||| || || || || || ||||| || || Sbjct 4866 GTTCAACCTTAACCGCATCATCGACGTGAACTACTACCCTATCCCCGAAGCTCGTCGCTC 4807 Query 364434 TAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGAT 364493 || ||||| |||||||| || || || ||||| || ||||| ||||| || ||| Sbjct 4806 CAACATGCGCCATCGCCCCATCGGACTCGGTGTTCAAGGCCTTGCTGATACCTTCATGGC 4747 Query 364494 GCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAAC 364553 ||| | ||| | || || ||||| || || | || || | ||||||| ||||| Sbjct 4746 CCTCCACATGCCCTTCGACTCGCCCGAAGCCAAGGCGCTGAACATTCAGATCTTCGAAAC 4687 Query 364554 AATGTAT 364560 |||||| Sbjct 4686 CATGTAT 4680 Score = 89.7 bits (98), Expect = 1e-12 Identities = 167/243 (69%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 364897 GGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAAC 364956 || || |||| |||| |||||||||| ||||||||| ||||| ||| | |||||| Sbjct 4288 GGTCTCTGGGACGACAACATGAAGAACATGATCATCGCCCACAATGGCTCTATCCAGAAC 4229 Query 364957 ATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAAT-TTCCAT 365015 ||||| |||| || || | ||| | | ||||||||||| ||||| || ||| Sbjct 4228 ATTCCTAACATTCCCGACGACGTCAAGGCGGTCTACAAAACCGTTTGGGAGATCAGCCAG 4169 Query 365016 GCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTT 365075 ||| || | || | || ||||| || || || || ||||||||||| ||| | Sbjct 4168 AAGAA-GGTCCTCGACCTCGCCGCCGACCGAGGAGCATTCATCTGTCAGAGTCAGAGTCT 4110 Query 365076 TAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTG 365135 ||||| | | | ||| ||||| | | |||| || |||||| ||||| || || Sbjct 4109 GAACGTCCACCTCTCCGCGCCTACCTCTGGCCAGCTCACCAGCATGCACTTCTATGGATG 4050 Query 365136 GAA 365138 ||| Sbjct 4049 GAA 4047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1300306176406398