Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq181137 87.8 1e-12 seq159561 87.8 1e-12 seq108638 87.8 1e-12 seq50769 87.8 1e-12 seq10083 87.8 1e-12 seq3558 87.8 1e-12 seq163823 86.0 4e-12 seq113360 86.0 4e-12 seq112063 86.0 4e-12 seq54962 86.0 4e-12 seq46716 86.0 4e-12 seq39851 86.0 4e-12 seq181710 84.2 1e-11 seq164837 84.2 1e-11 seq156869 84.2 1e-11 seq105449 84.2 1e-11 seq65650 84.2 1e-11 seq7214 84.2 1e-11 seq143669 82.4 5e-11 seq41785 82.4 5e-11 seq34296 82.4 5e-11 seq31346 82.4 5e-11 seq16281 82.4 5e-11 >seq181137 Length=58212 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 38110 CCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTA 38169 ||||||||||||| |||||| || ||||| ||||| || | ||| | || || | Sbjct 1406 CCAAATGAAGAGTCGACTCCTTCTGGATATTATAATCCGAAAGGGTACGACCATCCTCCA 1465 Query 38170 ATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAA 38229 | || || ||||| || || || ||||| ||||| | || | |||||| |||||| | Sbjct 1466 ACTGCTTCCCGGCGAAGATGAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGA 1525 Query 38230 TTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTAC 38289 | || |||||| || | || || || | || || || | || || || || | Sbjct 1526 TCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATCGTCTTGC 1585 Query 38290 CCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| | ||| || ||||| |||||||| Sbjct 1586 CCGTGAGGGTCTTGACGAAGATCTGCAT 1613 >seq159561 Length=61 Score = 87.8 bits (96), Expect = 1e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 19958 AAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATATTTA 20017 |||||||||||| ||||||||||||||||| |||||||||||||||| || |||||||| Sbjct 1 AAGTTCTTTTCATCTTTCCCTCACGGTACTGGTTCGCTATCGGTCTCTCGCCAATATTTA 60 Query 20018 G 20018 | Sbjct 61 G 61 >seq108638 Length=61 Score = 87.8 bits (96), Expect = 1e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||||||||||| |||||| ||||||||||||||||||||||||||| | Sbjct 61 CTCTCTTTCCAAAGTTCTTTTCATCTTTCCATCACGGTACTTGTTCGCTATCGGTCTCTC 2 Query 20007 G 20007 | Sbjct 1 G 1 >seq50769 Length=61 Score = 87.8 bits (96), Expect = 1e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||||||||||| |||||| ||||||||||||||||||||||||||| | Sbjct 1 CTCTCTTTCCAAAGTTCTTTTCATCTTTCCTTCACGGTACTTGTTCGCTATCGGTCTCTC 60 Query 20007 G 20007 | Sbjct 61 G 61 >seq10083 Length=61 Score = 87.8 bits (96), Expect = 1e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 19959 AGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATATTTAG 20018 ||||||||||| |||||||||||||||||| ||||||||||||||| || ||||||||| Sbjct 1 AGTTCTTTTCATCTTTCCCTCACGGTACTTTTTCGCTATCGGTCTCTCGCCAATATTTAG 60 Query 20019 C 20019 | Sbjct 61 C 61 >seq3558 Length=61 Score = 87.8 bits (96), Expect = 1e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTC 20004 |||||| | |||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct 3 CTCTCTTTCCAAAGTTCTTTTCATCTTTACCTCACGGTACTTGTTCGCTATCGGTCTC 60 >seq163823 Length=61 Score = 86.0 bits (94), Expect = 4e-12 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 19948 TCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007 ||||| | |||||||||||||| ||||||| |||||||||||||||||||||||||| || Sbjct 61 TCTCTTTCCAAAGTTCTTTTCATCTTTCCCGCACGGTACTTGTTCGCTATCGGTCTCTCG 2 >seq113360 Length=60 Score = 86.0 bits (94), Expect = 4e-12 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 19956 CAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATATT 20015 |||||||||||||| |||||||||||||| ||||||||||||||||||| || |||||| Sbjct 60 CAAAGTTCTTTTCATCTTTCCCTCACGGTTCTTGTTCGCTATCGGTCTCTCGCCAATATT 1 >seq112063 Length=61 Score = 86.0 bits (94), Expect = 4e-12 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 19956 CAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATATT 20015 |||||||||||||| |||||||||||||| ||||||||||||||||||| || |||||| Sbjct 2 CAAAGTTCTTTTCATCTTTCCCTCACGGTCCTTGTTCGCTATCGGTCTCTCGCCAATATT 61 >seq54962 Length=61 Score = 86.0 bits (94), Expect = 4e-12 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCT 20003 |||||| | |||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 57 CTCTCTTTCCAAAGTTCTTTTCATCTGTCCCTCACGGTACTTGTTCGCTATCGGTCT 1 >seq46716 Length=61 Score = 86.0 bits (94), Expect = 4e-12 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 19948 TCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007 ||||| | |||||||||||||| ||||||| |||||||||||||||||||||||||| || Sbjct 61 TCTCTTTCCAAAGTTCTTTTCATCTTTCCCCCACGGTACTTGTTCGCTATCGGTCTCTCG 2 >seq39851 Length=61 Score = 86.0 bits (94), Expect = 4e-12 Identities = 55/60 (92%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 19960 GTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGC 20019 |||||||||| ||||||||||||||||||| |||||||||||||| || |||||||||| Sbjct 61 GTTCTTTTCATCTTTCCCTCACGGTACTTGGTCGCTATCGGTCTCTCGCCAATATTTAGC 2 >seq181710 Length=78898 Score = 84.2 bits (92), Expect = 1e-11 Identities = 180/268 (67%), Gaps = 6/268 (2%) Strand=Plus/Plus Query 6232 CCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCG 6291 |||| | || || || || |||||||||||||||||||| ||||||| || ||| Sbjct 58271 CCAAAATTGAAGGCAAAGGTAACGGTATTAAAACCGTCATACCCAACATGGGAGATGTCT 58330 Query 6292 CTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCG 6351 | || || | |||||| |||| || | || |||| ||||| || ||||| || | Sbjct 58331 CCCGCGCCCTTAGTCGCCCTCCCACATATACCACCAAATTCTTCGGCTGTGAACTCGGAG 58390 Query 6352 CTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTG 6411 | ||||| | || | || |||||| | | |||||||||||| | | || || Sbjct 58391 CACAGACTTCTGTCGACGAGAAGAACGAGAGGTACATCGTTAACGGTGCCC---ACGATG 58447 Query 6412 CCAA---GCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAAT 6468 |||| || | || | || |||| ||| || |||||| || || || | | Sbjct 58448 CCAATCGTCTTCGTGAACTCCTCGACGTCTTCATCGACAAGTTCGTTCTATGCAAGTCCT 58507 Query 6469 GCGATAACCCGGAGACCGAGCTTATTGT 6496 || | ||||| ||||| || || ||||| Sbjct 58508 GCAAGAACCCCGAGACTGAACTCATTGT 58535 >seq164837 Length=61 Score = 84.2 bits (92), Expect = 1e-11 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000 |||||| | |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 54 CTCTCTTTCCAAAGTTCTTTTCAGCTTTCCCTCACGGTACTTGTTCGCTATCGG 1 >seq156869 Length=61 Score = 84.2 bits (92), Expect = 1e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 19963 CTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGCCTT 20022 ||||||| |||||||||||||||||||||| ||||||||||| || |||||||||| || Sbjct 1 CTTTTCATCTTTCCCTCACGGTACTTGTTCTCTATCGGTCTCTCGCCAATATTTAGCTTT 60 Query 20023 A 20023 | Sbjct 61 A 61 >seq105449 Length=61 Score = 84.2 bits (92), Expect = 1e-11 Identities = 55/61 (90%), Gaps = 5/61 (8%) Strand=Plus/Minus Query 25923 GTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCATGCGCGTCAC 25977 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 61 GTTTCGCTAGATAGTAGATAGGGACAGTGGTAATCTCGTTAATCCATTCATGCGCGTCAC 2 Query 25978 T 25978 | Sbjct 1 T 1 >seq65650 Length=61 Score = 84.2 bits (92), Expect = 1e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007 |||| | |||||||||||||| |||||||| ||||||||||||||||||||||||| || Sbjct 1 CTCTTTCCAAAGTTCTTTTCATCTTTCCCTTACGGTACTTGTTCGCTATCGGTCTCTCG 59 >seq7214 Length=61 Score = 84.2 bits (92), Expect = 1e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007 |||| | |||||||||||||| |||||||| ||||||||||||||||||||||||| || Sbjct 61 CTCTTTCCAAAGTTCTTTTCATCTTTCCCTAACGGTACTTGTTCGCTATCGGTCTCTCG 3 >seq143669 Length=61 Score = 82.4 bits (90), Expect = 5e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 19950 TCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007 ||| | |||||||||||||| ||||||||| |||||||||||||||||||||||| || Sbjct 61 TCTTTCCAAAGTTCTTTTCATCTTTCCCTCGCGGTACTTGTTCGCTATCGGTCTCTCG 4 >seq41785 Length=61 Score = 82.4 bits (90), Expect = 5e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 19956 CAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATA 20013 |||||||||||||| |||||||||||| ||||||||||||||||||||| || |||| Sbjct 4 CAAAGTTCTTTTCATCTTTCCCTCACGTTACTTGTTCGCTATCGGTCTCTCGCCAATA 61 >seq34296 Length=61 Score = 82.4 bits (90), Expect = 5e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 19950 TCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007 ||| | |||||||||||||| ||||||||| |||||||||||||||||||||||| || Sbjct 61 TCTTTCCAAAGTTCTTTTCATCTTTCCCTCTCGGTACTTGTTCGCTATCGGTCTCTCG 4 >seq31346 Length=61 Score = 82.4 bits (90), Expect = 5e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 19950 TCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCG 20007 ||| | |||||||||||||| ||||||||| |||||||||||||||||||||||| || Sbjct 1 TCTTTCCAAAGTTCTTTTCATCTTTCCCTCCCGGTACTTGTTCGCTATCGGTCTCTCG 58 >seq16281 Length=61 Score = 82.4 bits (90), Expect = 5e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 19964 TTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGGTAATATTTAGCCTTA 20023 |||||| ||||||||||||||||||||||| |||||||||| || |||||||||| ||| Sbjct 1 TTTTCATCTTTCCCTCACGGTACTTGTTCGATATCGGTCTCTCGCCAATATTTAGCTTTA 60 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334202249061359