Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq174905 187 3e-42 >seq174905 Length=21728 Score = 187 bits (206), Expect = 3e-42 Identities = 380/560 (68%), Gaps = 7/560 (1%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || || |||||||| | || || ||||| || | ||||| |||||||| Sbjct 14669 GCAGGCGAAATCGGTATGCATTCCCTCATCTCGGCTGATGAGTTCATTTGAAAATGTTAA 14728 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | || || || ||||| | ||||||||||||||| || ||||| || || Sbjct 14729 GCCAGGCATGAGCCCCCGCTTCTTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAGAA 14788 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 || ||||| || || ||||| || || | ||| || ||||| | || | || | | Sbjct 14789 GATGCCTTCGACCGCGGCAAAAGCGACTAGACGCTCAGCAAA-TGTGGAGCCTTCGT-CA 14846 Query 93271 GAT--CCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 ||| ||| || | ||||| || || || ||| || ||||| | ||| || || ||| Sbjct 14847 GATATCCACTTGAGGGCCCATTCAGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCG 14906 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 | |||||| || |||| | | | || ||||| || ||||| | || ||||| Sbjct 14907 TCAAATAGATACTCTCTTTGATTTGGGTCCTTGATGTAGGTGTCGATGAGAAGGGAATAG 14966 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 | || | ||||| |||||||| |||||| || || |||||||| | ||||| | | Sbjct 14967 GTCTCTGCGTGGACGTTCTCCATCATAATTTGAAACCCATAGAAACAGCGTGCTTCGGCG 15026 Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508 | || ||||| | || || | | || |||||||||||||| ||||| || || || Sbjct 15027 ACTTGTACTTCGTTGGAGAAACGTTGAACAAGATTTTCATTGACGATACCGTCAGAAGCG 15086 Query 93509 GCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAG---CTTATCC 93565 ||||| || || | || || |||||||| || | || || || || | | Sbjct 15087 GCAAAGAAGGCAAGGATGTGTGAAATAAAATGGCGTTCGTTGTCGTTTAGATTGTTGTTC 15146 Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 || || ||| || | || | ||| | |||||| |||||||||| ||||| || || Sbjct 15147 CAGTCCATTAGGTCGTGAGATAAATCCAGTTCTTCAGCAGTCCAAAATGATGCCTCCGCC 15206 Query 93626 TTTTTGTACATATCCCATAT 93645 || |||||||| | ||| || Sbjct 15207 TTCTTGTACATCTGCCAGAT 15226 Score = 145 bits (160), Expect = 8e-30 Identities = 371/562 (66%), Gaps = 11/562 (2%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || |||||||| || | ||| || || || || | ||| ||| ||| || || Sbjct 16862 GCAGGCGAAGTCGGTGTGCATACCCTCATCGCGACTGATGAGCTCGTTGGAGAAGGTCAA 16803 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | || ||| || ||||| | ||| || || || || || |||||||| || Sbjct 16802 GCCGGGCATCATTCCACGCTTCTTCATCCAGAAGATGGATGCGAACGACCCAGAAAAGAA 16743 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 || || || ||||| ||||| || |||| ||||| | ||| | |||| | ||| | Sbjct 16742 AATCCCCTCAACGGCGGCAAAGGCGACAAGGCGTTCACCGAAAGT---GGAACT-CTGGT 16687 Query 93271 ----GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAG 93326 |||||| || | ||||| || || || || || || || | ||||| | || Sbjct 16686 CGGAGATCCACTTGAGGGCCCAGTCAGCCTTGCGTTTGATGCAGGGAATGGTTTCAACAG 16627 Query 93327 CGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAAT 93386 ||| || ||| | || || | | | ||| ||||| || ||||| | ||||| | Sbjct 16626 CGTCGAACAGGAAGTCGCGTTGAGCGGGCTCTTTGATGTACGTGTCGATGAGGAGAGAGT 16567 Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446 | |||| || |||| || ||||| ||| ||||| || ||||| || | ||| || | Sbjct 16566 AGGTTTCGGAGTGGATGTTTTCCATCATAATCTGGAAGCCATAGAAGCAACGAGCCTCGG 16507 Query 93447 TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATG 93506 | || ||||| || || | || | || ||||||||||| ||||| || || | Sbjct 16506 CGGCTTGTACTTCACCGGAGAAGCGTTCGAGAAGGTTTTCATTGACGATACCGTCAGACG 16447 Query 93507 CTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTAT 93563 | || || ||||| | | || || || || ||| | || || | | || | Sbjct 16446 CCGCGAAGAAAGCGAGAACGTGTGAAATGAAGTGGCGCTCGTTGTCGTTCAGGCGGTTGT 16387 Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623 ||| || ||||| || || ||||| | ||||| | ||||| ||||| || || | Sbjct 16386 TCCAGTCATGAAGATCCTTCGAGAGATCCATCTCTTCAGCTGTCCAGAACGACGCCTCCG 16327 Query 93624 CTTTTTTGTACATATCCCATAT 93645 |||| |||||||| | ||| || Sbjct 16326 CTTTCTTGTACATCTGCCAGAT 16305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555590537868360