Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq174905 100 6e-16 seq179325 96.9 7e-15 seq178594 84.2 4e-11 >seq174905 Length=21728 Score = 100 bits (110), Expect = 6e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 251545 TATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATG 251604 ||||| || ||||| |||||||| || | |||||||| || ||||| | |||||| Sbjct 17196 TATTCCGAGACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATGTCCATG 17137 Query 251605 AAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGG 251664 |||||||||||||| |||| ||||| |||| || ||| || | ||| | | ||| Sbjct 17136 AAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTGTCATTGCCCAGAGATACAAGCAGACGG 17077 Query 251665 TCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714 || || || ||||| | ||||| | ||| || | || |||||||| || Sbjct 17076 TCGGCAACGAACTCGATGTACTGGCACATGAGCTTAGCATTCATGCCGAT 17027 >seq179325 Length=24978 Score = 96.9 bits (106), Expect = 7e-15 Identities = 136/189 (72%), Gaps = 3/189 (2%) Strand=Plus/Minus Query 280145 GCAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTAC 280204 ||| |||||| || || || | | ||| | |||||||| ||| | || ||||| || Sbjct 1523 GCAAGTTTCTCTGTCTTCCCGTGTCGCCGTCCTCGGACCCAACGGTTCCGGAAAGTCCAC 1464 Query 280205 CCTAATCAAAGTCCTGACTGGCGAGACCCAGGCCACTGAGGG--GTCCGTT-TGGAAGCA 280261 ||| |||| |||| || || || | || ||| |||| || | | |||||||| Sbjct 1463 CCTCGTCAAGCTCCTCACCGGAGACATGGAGCCCAACAAGGGCGGTGAGATCTGGAAGCA 1404 Query 280262 TCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCT 280321 ||| ||| || || | ||| ||||| ||||||||||||||||||||||| | ||| || Sbjct 1403 TCCTAACTTGGTCATCGGTTATGTCGCCCAGCACGCTTTCCACCACATCGATAGCCATCT 1344 Query 280322 GGACATGAC 280330 |||| ||| Sbjct 1343 CGACAAGAC 1335 >seq178594 Length=29560 Score = 84.2 bits (92), Expect = 4e-11 Identities = 175/261 (67%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 293106 GTTCATGCTCTGCGTCTGATCGACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGT 293165 ||||| ||||| ||||| || || || || || || || |||||||| | || | Sbjct 4106 GTTCAGACTCTGACTCTGACAGATGAATGCTCCTCGGTCGGCGGCGAGGTCGAGGACCTT 4165 Query 293166 CTTCATAGAGATCTCCCACGATGTCTTGTACACTGCCTTGACATCAGGATGAATGCCAAT 293225 |||| ||||||||| || ||||| || |||||||| || ||||| | Sbjct 4166 CTTCTGGCTGATCTCCCAAACGGTTTTGTAGACCGCCTTGACGTCGTCGGGAATGTTAGG 4225 Query 293226 AACCTTCTGGATAGACCCTCCGTTGGCAATAATCTGGTTCTTCATTGTCTCGGACCAAGT 293285 || ||||||||||| || || ||| || ||| ||||||||| | ||| ||| Sbjct 4226 AATGTTCTGGATAGAGCCATTGTGGGCGATGATCATGTTCTTCATGTTGTCGTCCCAGAG 4285 Query 293286 CCCACGAGCAATGAGCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAG 293345 ||| || | | |||||||| | ||| | | | || || ||||||| || ||||| Sbjct 4286 ACCAAGATCGACAAGCTCGCGCAGAAGCCATGGGCAAACGACCTGGAACTCTCCGGCGAG 4345 Query 293346 AGTGCGACGGCTGTAAATGTT 293366 | ||||| |||| ||||| Sbjct 4346 AACACGACGAGTGTAGATGTT 4366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1025433573343249