Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq181137 192 1e-43 seq175168 183 6e-41 seq178676 102 1e-16 seq176134 93.3 8e-14 seq179325 86.0 1e-11 seq179408 84.2 4e-11 seq179407 84.2 4e-11 >seq181137 Length=58212 Score = 192 bits (212), Expect = 1e-43 Identities = 168/209 (80%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68254 CCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || || || ||||| || ||||| |||||||| || || || | ||||| || | Sbjct 1406 CCAAATGAAGAGTCGACTCCTTCTGGATATTATAATCCGAAAGGGTACGACCATCCTCCA 1465 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 |||||||||||||||| ||||| | ||| || || || ||||||||||||||||| || | Sbjct 1466 ACTGCTTCCCGGCGAAGATGAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGA 1525 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||| ||||| ||| ||||||||||| | || || || |||| ||||| || || | Sbjct 1526 TCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATCGTCTTGC 1585 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||||||||||||||||| ||||||||| Sbjct 1586 CCGTGAGGGTCTTGACGAAGATCTGCATT 1614 Score = 165 bits (182), Expect = 1e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || || || || | || | || || || |||||||| || ||||| ||||| | Sbjct 1613 TTCCACCACGCAGACGAAGGACGAGATGGAGAGTCGACTCTTTCTGAATGTTGTAATCAG 1672 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | |||||||| | |||||| |||||||| || || | ||||||||| || | Sbjct 1673 AAAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATAAGACGTTGTTGGTCTGGGG 1732 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | ||||| ||||| || || ||||| ||||| || ||||||||||| | || || | Sbjct 1733 GGATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTATCGATGGTGTCAGAGGACTCCA 1792 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || | |||||| || || || ||||||||||||||||| |||||||| Sbjct 1793 CCTCGAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 1841 Score = 150 bits (166), Expect = 3e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || || ||||| || |||||||| || ||||| | || | || ||||| | |||| Sbjct 1867 TGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGATAAGGTACGGCCGTCTTCGAGCTGC 1926 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 |||||||| || || || | || ||||| || ||||| || |||||||||||||||||| Sbjct 1927 TTCCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGAATCTTT 1986 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 || || ||| || ||||| || | || || || || | |||||||| || |||||| Sbjct 1987 GCTTTCACGTTGTCAATGGTATCCGAAGACTCCACCTCAAGAGTGATGGTCTTGCCCGTG 2046 Query 68439 AGGGTCTTGACGAATATCTGCAT 68461 |||||||| || || |||||||| Sbjct 2047 AGGGTCTTAACAAAGATCTGCAT 2069 Score = 96.9 bits (106), Expect = 6e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || ||||||||||| ||||| ||||||||| || ||||| |||| || || || || Sbjct 2465 CCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTATCTGAGGACTCAACCTCG 2524 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 | |||||| || ||||| ||||| ||||| ||||| ||||||||| || Sbjct 2525 AGGGTGATTGTCTTTCCAGTGAGAGTCTTTACGAAGATCTGCATTCTG 2572 >seq175168 Length=26499 Score = 183 bits (202), Expect = 6e-41 Identities = 352/511 (69%), Gaps = 6/511 (1%) Strand=Plus/Minus Query 268284 CATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGA 268343 |||| |||||||| |||| || || | || ||||| | |||||| ||||| || | Sbjct 11599 CATGTCCCCAATCCCGCTGGGCATCGACATTTCCGAGATATAGGCATGCTTGCTTTCCCA 11540 Query 268344 GCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGT-CTCGCCACGTAGA 268402 | || | | ||| | | || |||| || | |||||||| || ||| || | Sbjct 11539 GTTTAATGTCTGCCGCAGCCCGGCTGATCTTCCTTGTCACGAATGTTCTC-CCTCTCCTT 11481 Query 268403 GGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAG 268462 ||||| ||||||||||| | ||| ||||| |||||| ||| |||||| ||||| | || Sbjct 11480 GGGCTTTCGTGGTTGAACAAGATCCCGTTACACGCGTACACGCCATACGCCTCCCTATAA 11421 Query 268463 TTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAG 268522 || || || |||| ||||| | | ||| ||| | || || || || || | || Sbjct 11420 TTGACCACAATCCAATATGCGTATAGCTTCGCACAACCATATGGCGATCGCGGGTAAAAC 11361 Query 268523 GGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCT 268582 ||||| || | ||||| |||| ||||||||| | |||||||| || || || Sbjct 11360 GGCGTTGTTTCACTCTGAGGAGTTTCCATGACTTTGCCGTATAGCTCGGATGTAGAAGCC 11301 Query 268583 TGGTAGAACTTTGTTGT-TTTTTCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAG 268641 || || || | || |||||| || |||||| |||||||||| || || | ||||| Sbjct 11300 TGATAAAAGCG-GACGTGTTTTTCCAGCCCGCAGGTTCGGATTGCATCCAGGAGTCGAAG 11242 Query 268642 AGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTCGAATGACACCTGGACATG 268701 || || | || || ||||| | |||||||| | |||||||||||| |||| ||| || Sbjct 11241 TGTACCGAGACCGTCAACGTCTCCGGTATACTCTGCCATCTCGAATGAAACCTTGACGTG 11182 Query 268702 GCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCTGCTGC-ACGATCTTCACGA 268760 ||||| || || || || | ||| || | ||| || ||| | ||| | || | Sbjct 11181 AGATTGGGCACCAAGATTGTAGATCTCCGTGGGCTGGACTTG-TGCGATGATGTAGACTA 11123 Query 268761 GGTTCGTTGAGTCGGTGAGGTCTCCGTAGTG 268791 | || || |||| |||| ||||||||||| Sbjct 11122 GATTGGTGCTGTCGCTGAGATCTCCGTAGTG 11092 >seq178676 Length=5582 Score = 102 bits (112), Expect = 1e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||| || ||||| ||||||||| ||||||||||| | || || || || Sbjct 4513 CCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGACGACTCCACCTCT 4454 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | |||||| || ||||||||||||||||||||||| || ||||| Sbjct 4453 AGGGTGATCGTCTTTCCCGTGAGGGTCTTGACGAAAATTTGCAT 4410 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | |||||||| || ||||||||||| || || || || | ||||| || Sbjct 4682 ACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTTCGGCCATCCTCG 4623 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAAT 68356 | |||||| |||||||| ||||| | || |||||||| || || Sbjct 4622 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGAT 4579 >seq176134 Length=3119 Score = 93.3 bits (102), Expect = 8e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || ||||||||||| ||||| |||||||| || ||||| || | || || || || Sbjct 2975 CCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTATCAGAGGACTCAACCTCG 2916 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||||| ||||| ||||||||||| ||||| |||||||| Sbjct 2915 AGGGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAGATCTGCAT 2872 >seq179325 Length=24978 Score = 86.0 bits (94), Expect = 1e-11 Identities = 149/216 (69%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || ||||| | ||||||| | |||| |||| || ||| | || || ||||||||| Sbjct 1308 TAACGCCAGAGCATGTACTCAAGCGCGGTCTTGTCGAGATGGCTATCGATGTGGTGGAAA 1367 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCA---CACAGAGCCCCGA 225094 || |||||||| || || | ||| || ||| ||||||||||| | || |||| Sbjct 1368 GCGTGCTGGGCGACATAACCGATGACCAAGTTAGGATGCTTCCAGATCTCACCGCCCTTG 1427 Query 225095 GTCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGG 225154 | || | || |||||||||| ||||| ||| || | ||| || | ||| ||||| Sbjct 1428 TTGGGCTCCATGTCTCCGGTGAGGAGCTTGACGAGGGTGGACTTTCCGGAACCGTTGGGT 1487 Query 225155 CCAATCACGCCAATCCGGGATGACATTGCAACCTGC 225190 || | ||| | | ||||| |||| | ||| ||| Sbjct 1488 CCGAGGACGGCGACACGGGAAGACAGAGAAACTTGC 1523 >seq179408 Length=3068 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | |||||||| || ||||||||||| || || || || | ||||| || Sbjct 2870 ACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTTCGGCCATCCTCG 2929 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAAT 68356 | |||||| |||||||| ||||| | || |||||||| || || Sbjct 2930 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGAT 2973 >seq179407 Length=3065 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| | |||||||| || ||||||||||| || || || || | ||||| || Sbjct 2867 ACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTTCGGCCATCCTCG 2926 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAAT 68356 | |||||| |||||||| ||||| | || |||||||| || || Sbjct 2927 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGGGGGAT 2970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 919520075623080