Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq181137 87.8 2e-12 >seq181137 Length=58212 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | || | ||| | || || ||||| |||||||||||||| Sbjct 1612 ATTCCACCACGCAGACGAAGGACGAGATGGAGAGTCGACTCTTTCTGAATGTTGTAATCA 1671 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || |||||| || || || || ||| |||| ||||| |||||||| || Sbjct 1672 GAAAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATAAGACGTTGTTGGTCTGGG 1731 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || || || ||||| || | | || | |||||| | ||| || Sbjct 1732 GGGATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTATCGATGGTGTCAGAGGACTCC 1791 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | ||| | ||| || || || || || || || || ||||||||| Sbjct 1792 ACCTCGAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCATG 1842 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 114177 AAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGT 114236 ||||| | || || || || || || || ||||| | |||||| ||| || | Sbjct 1408 AAATGAAGAGTCGACTCCTTCTGGATATTATAATCCGAAAGGGTACGACCATCCTCCAAC 1467 Query 114237 TGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATC 114296 || || || ||| |||||||||| || || || |||||||||||||| ||||| ||| Sbjct 1468 TGCTTCCCGGCGAAGATGAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATC 1527 Query 114297 TTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCG 114356 || || | | || | |||||| | || || || |||| || | ||| ||||| Sbjct 1528 TTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATCGTCTTGCCC 1587 Query 114357 GTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || || || || |||||||| Sbjct 1588 GTGAGGGTCTTGACGAAGATCTGCAT 1613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419199985514268