Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq181137 107 2e-18 >seq181137 Length=58212 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||||| || || || || || |||||||| || | | ||| || ||||| Sbjct 1858 AGGACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGATAAGGTACGGCCGTCT 1917 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||| |||||| | || || ||||||||||| || ||||| || || || ||| Sbjct 1918 TCGAGCTGCTTCCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCT 1977 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | | |||||||| || || | ||||| | ||||| || | ||| | ||| Sbjct 1978 TG-AATCTTTGCTTTCACGTTGTCAATGGTATCCGAAGACTCCACCTCAAGAGTGATGGT 2036 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | || || || || || ||||| Sbjct 2037 CTTGCCCGTGAGGGTCTTAACAAAGATCTGCAT 2069 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || |||| | ||| || ||||| | ||||| ||||| |||||||||||||| | Sbjct 1615 CCACCACGCAGACGAAGGACGAGATGGAGAGTCGACTCTTTCTGAATGTTGTAATCAGAA 1674 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| | ||||| |||||||||||||| | || || || || ||||| || || Sbjct 1675 AGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATAAGACGTTGTTGGTCTGGGGGG 1734 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| ||| || | || ||| || ||||| Sbjct 1735 ATGCCCTCCTTATCCTGGATCTTCGCCTTCACATTATCGATGGTGTCAGAGGACTCCACC 1794 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||| || || | || || ||||| || ||||| Sbjct 1795 TCGAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 1841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498505054001160