Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq181137 118 1e-21 seq174905 104 2e-17 >seq181137 Length=58212 Score = 118 bits (130), Expect = 1e-21 Identities = 167/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||| ||| | || | ||| | | | |||||||| || |||||||||||| Sbjct 1842 GCCACCACGCAGACGGAGGACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGA 1901 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||||| ||| ||||| || || |||| | |||| |||||||| ||||| || || Sbjct 1902 TAAGGTACGGCCGTCTTCGAGCTGCTTCCCGGCAAAGATAAGACGCTGCTGGTCTGGGGG 1961 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || ||||| ||| | |||| ||| | ||| || | ||| || | |||||| Sbjct 1962 AATACCCTCCTTGTC-TTGAATCTTTGCTTTCACGTTG-TCAATGGTATCCGAAGACTCC 2019 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| | || | || || || || || || || ||||| ||||||||| Sbjct 2020 ACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAACAAAGATCTGCATG 2070 >seq174905 Length=21728 Score = 104 bits (114), Expect = 2e-17 Identities = 123/162 (76%), Gaps = 6/162 (4%) Strand=Plus/Plus Query 52671 GGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTG 52730 |||||||| || || ||||||| ||||||||||||| || || || |||||| | || Sbjct 17030 GGCATGAATGCTAAGCTCATGTGCCAGTACATCGAGTTCGTTGCCGACCGTCTGCTTGT- 17088 Query 52731 CAGCTC-GGGCA--GCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAAC 52787 | ||| ||||| | ||| || || |||| | ||| || || || || ||| ||| Sbjct 17089 -ATCTCTGGGCAATGACAAGGT-CTACAACTCCACCAACCCCTTCGACTTCATGGACATG 17146 Query 52788 ATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTC 52829 || ||||| |||||||||||||||| ||||||||||| ||| Sbjct 17147 ATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGTGTC 17188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495130369636080