Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq174905 123 3e-23 seq178594 93.3 5e-14 >seq174905 Length=21728 Score = 123 bits (136), Expect = 3e-23 Identities = 335/504 (66%), Gaps = 9/504 (2%) Strand=Plus/Plus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 ||||| || ||| |||||||||||| || || | || |||||||| ||||||||| Sbjct 14691 CCCTCATCTCGGCTGATGAGTTCATTTGAAAATGTTAAGCCAGGCATGAGCCCCCGCTTC 14750 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 || | ||| || || | | || ||||||||||||||||| || || || || || Sbjct 14751 TTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAGAAGATGCCTTCGACCGCGGCAAAA 14810 Query 127658 GCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCGCCCACTG 127716 || | ||||||||| ||||| | | | | ||| || | | |||||| | ||||| | Sbjct 14811 GCGACTAGACGCTCAGCAAATGTG-GAGCCTTCGTCAGATATCCACTTGAGGGCCCATTC 14869 Query 127717 TGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCT-TCTTTTCTG 127775 ||||| || ||| || || | |||| || || ||||| || | || ||||| | Sbjct 14870 AGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCGTCAAATAGATACTCTCTTTGAT- 14928 Query 127776 ATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT-TTCA 127834 ||| || |||||||| | || ||||| ||||| || || ||||||| | | || Sbjct 14929 TTGGGTCCTTGATGTAGGTGTCGATGAGAAGGGAATAGGTCTCTGCGTGGACGTTCTCCA 14988 Query 127835 TTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAAAA 127894 | || ||| || | |||||| |||| |||||| | ||||| || | || ||| Sbjct 14989 TCAT-AATTTGAAACCCATAGAAACAGCGTGCTTCGGCGACTTGTACTTCGTTGGAGAAA 15047 Query 127895 TTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATATAC 127954 | | | ||| ||| || || || || || | ||||| || || ||||| | Sbjct 15048 CGTTGAACAAGATTTTCATTGACGATACCGTCAGAAGCGGCAAAGAAGGCAAGGATGTGT 15107 Query 127955 TTTATGAATTTCTGTTCATTCTCGTTCAG---GGTCTTCCAGTCGTCGAGATCCTTTGAG 128011 || || | |||| || ||||| || | | |||||||| || || | || Sbjct 15108 GAAATAAAATGGCGTTCGTTGTCGTTTAGATTGTTGTTCCAGTCCATTAGGTCGTGAGAT 15167 Query 128012 AGATCTACCTCCTCCGCAGTCCAA 128035 | ||| | || || ||||||||| Sbjct 15168 AAATCCAGTTCTTCAGCAGTCCAA 15191 >seq178594 Length=29560 Score = 93.3 bits (102), Expect = 5e-14 Identities = 181/266 (68%), Gaps = 1/266 (0%) Strand=Plus/Plus Query 117018 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACT 117077 |||||||| || || ||||| || || ||| || ||||| | ||||| | Sbjct 5697 GTGGATGTTCAATCCGATACCACCGGCAGTCTTGCTAATCATGGCGCAGCTCTTGAGAGT 5756 Query 117078 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 117137 ||||||| |||||||| |||||| |||| | || ||||||||| || | ||| Sbjct 5757 ATCGTAGATACCATCGATGGAGTCATCCTTCATGCAGACTAGGAAGCAGGAAGAGAGTTG 5816 Query 117138 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGA 117197 || ||||||||||||||||| ||||| || | ||||| |||| || || || Sbjct 5817 CGGATGGGGTGTACCAGCGTTGAACAGGGTAGGCGAGGCGTGTGTGAAGTAACGTTCTGA 5876 Query 117198 CATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGAC 117257 ||| | ||||||||| | |||| | || || || ||||| ||||| | | || Sbjct 5877 CATGAGGTTGTAGGTCTCAAGGACATGGTCGATATCATCGCCGTGGATACCAACGGCCAC 5936 Query 117258 CCGCATAAACATGTATTG-GGGTGTT 117282 ||||| | ||| | ||| ||| ||| Sbjct 5937 ACGCATGATCATATGTTGAGGGCGTT 5962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 612107721057240