Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq181137 136 9e-27 seq179408 102 2e-16 seq179407 102 2e-16 seq178676 102 2e-16 seq173931 95.1 3e-14 >seq181137 Length=58212 Score = 136 bits (150), Expect = 9e-27 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || |||||||||||||| |||| || || || | | || | ||||| |||| |||| Sbjct 1411 TGAAGAGTCGACTCCTTCTGGATATTATAATCCGAAAGGGTACGACCATCCTCCAACTGC 1470 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || ||||||||||||||||| ||||| || ||| ||| ||||| ||||| ||||| Sbjct 1471 TTCCCGGCGAAGATGAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTC 1530 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||||||| |||| |||||| | | || || |||| |||||||||||| |||||| Sbjct 1531 GCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATCGTCTTGCCCGTG 1590 Query 199607 AGAGTTTTCACAAAAATTTG 199626 || || || || || || || Sbjct 1591 AGGGTCTTGACGAAGATCTG 1610 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || || || || |||||||| |||| ||||||||| | || || | || ||| Sbjct 1858 AGGACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGATAAGGTACGGCCGTCT 1917 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||| ||||| |||||||||||||| || ||| || || || Sbjct 1918 TCGAGCTGCTTCCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCT 1977 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||||||| |||||| || | ||| || | | || || || | ||||| ||| Sbjct 1978 TGAATCTTTGCTTTCACGTTGTCAATGGTATCCGAAGACTCCACCTCAAGAGTGATGGTC 2037 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || ||||| || || Sbjct 2038 TTGCCCGTGAGGGTCTTAACAAAGATCTG 2066 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || |||||||||||||| || || | |||||| |||| | || | |||||| Sbjct 1630 AGGACGAGATGGAGAGTCGACTCTTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCT 1689 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||| ||||| || ||||| || || || || ||| Sbjct 1690 TCGAGCTGCTTGCCGGCGAAGATAAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTATCC 1749 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| |||||| | | || || || | ||||||||| Sbjct 1750 TGGATCTTCGCCTTCACATTATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATCGTC 1809 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 1810 TTCCCTGTGAGGGTCTTGACGAAGATCTG 1838 Score = 93.3 bits (102), Expect = 1e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||||||||| |||||||| |||| |||||| || | | ||| | ||||| Sbjct 2309 AGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCC 2368 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || |||||||| | ||||||||||| || Sbjct 2369 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCTGG 2409 >seq179408 Length=3068 Score = 102 bits (112), Expect = 2e-16 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| | ||| |||||||| |||| ||| ||||| | || || | ||||| Sbjct 2867 AGGACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTTCGGCCATCC 2926 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || ||||||||||||||||||||||||||||||||||| || Sbjct 2927 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGG 2967 >seq179407 Length=3065 Score = 102 bits (112), Expect = 2e-16 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| | ||| |||||||| |||| ||| ||||| | || || | ||||| Sbjct 2864 AGGACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTTCGGCCATCC 2923 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || ||||||||||||||||||||||||||||||||||| || Sbjct 2924 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGG 2964 >seq178676 Length=5582 Score = 102 bits (112), Expect = 2e-16 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| | ||| |||||||| |||| ||| ||||| | || || | ||||| Sbjct 4685 AGGACCAAGTGCAAAGTGGACTCCTTCTGGATGTTATAGTCCGACAGGGTTCGGCCATCC 4626 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || ||||||||||||||||||||||||||||||||||| || Sbjct 4625 TCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGG 4585 >seq173931 Length=6298 Score = 95.1 bits (104), Expect = 3e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || ||||||||||| |||||||| |||| ||||||||| | ||| Sbjct 5728 CGAAGACGCAACACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTG 5669 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 | |||||||| ||||||||||| || ||||| ||||| ||||| || || Sbjct 5668 CGACCATCTTCGAGCTGCTTTCCAGCAAAGATCAGACGTTGCTGATCGGG 5619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176165115881763