Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq181137 120 3e-22 seq176134 95.1 1e-14 seq173931 84.2 2e-11 >seq181137 Length=58212 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| |||||| ||||| ||||||||||||| || || |||| ||| Sbjct 1861 ACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGATAAGGTACGGCCGTCTTCG 1920 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| ||||| || || | ||||||||||| | || | | ||||||||| Sbjct 1921 AGCTGCTTCCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGA 1980 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| | ||| ||| | | | || || || ||||| || | |||||||| || Sbjct 1981 ATCTT-TGCTTTCACGTTGTCAATGGTATCCGAAGACTCCACCTCAAGAGTGATGGTCTT 2039 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||| || || ||||||||||| ||||| Sbjct 2040 GCCCGTGAGGGTCTTAACAAAGATCTGCAT 2069 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || || || ||||| || || || ||||| | || |||||||||||||||||||| Sbjct 1650 CTCTTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAA 1709 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || || ||||| | || | || |||||| ||| ||||||| ||| | | Sbjct 1710 GATAAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTCGCCTTCACATT 1769 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || ||||| || | ||||| || || || || || || || || Sbjct 1770 ATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATCGTCTTCCCTGTGAGGGTCTTGAC 1829 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 1830 GAAGATCTGCAT 1841 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || |||||||| | || || ||||||||||| ||||| Sbjct 2329 CTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAA 2388 Query 46462 TATCAAGCGCTGCTGGTC 46479 ||||||||||||||||| Sbjct 2389 GATCAAGCGCTGCTGGTC 2406 >seq176134 Length=3119 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 46400 CTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCG 46459 |||||||| || || |||||||| || |||||||| |||| ||||||||||| || ||| Sbjct 3118 CTCTCCTTCTGAATGTTGTAGTCAGAAAGAGTGCGACCGTCCTCGAGCTGCTTTCCAGCG 3059 Query 46460 AATATCAAGCGCTGCTGGTCGG 46481 || ||||| ||||||||||||| Sbjct 3058 AAGATCAAACGCTGCTGGTCGG 3037 >seq173931 Length=6298 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 |||||||||||| || | ||| |||||| ||||| ||||||||| |||||||| | Sbjct 5723 ACGCAACACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGACC 5664 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGG 46481 || ||||||||||| || || || |||| || ||||| |||| Sbjct 5663 ATCTTCGAGCTGCTTTCCAGCAAAGATCAGACGTTGCTGATCGG 5620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563949027620280