Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq174905 235 5e-57 seq181137 113 4e-20 >seq174905 Length=21728 Score = 235 bits (260), Expect = 5e-57 Identities = 408/586 (70%), Gaps = 13/586 (2%) Strand=Plus/Minus Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 |||||| | ||| || |||||| |||| ||||| || | ||||| |||||| Sbjct 16872 TGAACAAAAGGCAGGCGAAGTCGGTGTGCATACCCTCATCGCGACTGATGAGCTCGTTGG 16813 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 ||| |||||||||||||| | || || || || | ||| || |||| ||||| | Sbjct 16812 AGAAGGTCAAGCCGGGCATCATTCCACGCTTCTTCATCCAGAAGATGGATGCGAACGACC 16753 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT 133063 | |||||||| | ||||| ||||| || || || || ||||| || ||||| |||| Sbjct 16752 CAGAAAAGAAAATCCCCTCAACGGCGGCAAAGGCGACAAGGCGTTCACCGAAAGTGGAA- 16694 Query 133064 CTTTGCT-GGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTT 133122 || || | || |||||| || ||||| || ||||| ||||| ||| || || ||| Sbjct 16693 CTCTGGTCGGAGATCCACTTGAGGGCCCAGTCAGCCTTGCGTTTGATGCAGGGAATGGTT 16634 Query 133123 TCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC----ACGTAGGTGTCGAT 133178 || | |||| |||| | ||| | || | || | | | ||| |||||||| Sbjct 16633 TCAACAGCGTCGAACAG--GAAGTCGCG-TTGAGCGGG-CTCTTTGATGTACGTGTCGAT 16578 Query 133179 GAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCA 133238 |||| || || |||| ||||| | ||| ||||| || || ||||| || ||||| Sbjct 16577 GAGGAGAGAGTAGGTTTCGGAGTGGATGTTTTCCATCATAATCTGGAAGCCATAGAAGCA 16518 Query 133239 CCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGAT 133298 || |||||| | | || ||||| | ||| || |||| || ||||| |||||||| Sbjct 16517 ACGAGCCTCGGCGGCTTGTACTTCACCGGAGAAGCGTTCGAGAAGGTTTTCATTGACGAT 16458 Query 133299 GCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTT 133358 ||||| || ||||| || || || ||||| ||||| ||||||||||||||||| Sbjct 16457 ACCGTCAGACGCCGCGAAGAAAGCGAGAACGTGTGAAATGAAGTGGCGCTCGTTGTCGTT 16398 Query 133359 CAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAA 133415 || ||| | |||||| | ||||| || || |||| ||| || | ||||| || Sbjct 16397 CAGGCGGTTGTTCCAGTCATGAAGATCCTTCGAGAGATCCATCTCTTCAGCTGTCCAGAA 16338 Query 133416 CGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGT 133461 ||||||||| ||||| |||||||| ||| || | ||| ||||| Sbjct 16337 CGACGCCTCCGCTTTCTTGTACATCTGCCAGATCTGCGAGCATTGT 16292 Score = 203 bits (224), Expect = 3e-47 Identities = 382/556 (69%), Gaps = 17/556 (3%) Strand=Plus/Plus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAA--GTC 132951 ||| || || ||| ||||| ||||| || | | |||||||| || ||||| || Sbjct 14669 GCAGGCGAAATCGGTATGCATTCCCTCATCTCGGCTGATGAGTTCATT--TGAAAATGTT 14726 Query 132952 AAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAG 133011 ||||| |||||||| || || || || | ||||||||| | ||||| ||| || ||| Sbjct 14727 AAGCCAGGCATGAGCCCCCGCTTCTTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAG 14786 Query 133012 AAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTG 133071 |||| ||| ||||| || || ||||| || || ||||| | || |||| ||| | Sbjct 14787 AAGATGCCTTCGACCGCGGCAAAAGCGACTAGACGCTCAGCAAATGTGGAGCCTTCGTCA 14846 Query 133072 GCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCG 133131 | ||||| || |||||||| ||||| |||| ||| || || || || |||||| Sbjct 14847 GATATCCACTTGAGGGCCCATTCAGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCG 14906 Query 133132 TTCAACAAACGGAGTTTCTCTTCCGA----GGAACGC-ACGTAGGTGTCGATGAGGGTCG 133186 | |||| || |||||| || || | | ||||||||||||||| | Sbjct 14907 T----CAAATAGATACTCTCTTT-GATTTGGGTCCTTGATGTAGGTGTCGATGAGAAGGG 14961 Query 133187 AATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCT 133246 |||| | || | ||| ||||||||||| |||||||| || || || || || || | Sbjct 14962 AATAGGTCTCTGCGTGGACGTTCTCCATCATAATTTGAAACCCATAGAAACAGCGTGCTT 15021 Query 133247 CGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGC 133306 || | || || ||||| | | |||||| | || |||||||| |||||||| ||||| Sbjct 15022 CGGCGACTTGTACTTCGTTGGAGAAACGTTGAACAAGATTTTCATTGACGATACCGTCAG 15081 Query 133307 TGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA---AGC 133363 ||||| || ||||| || | ||| || |||||||| ||||||||||| | | Sbjct 15082 AAGCGGCAAAGAAGGCAAGGATGTGTGAAATAAAATGGCGTTCGTTGTCGTTTAGATTGT 15141 Query 133364 GCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCT 133423 | |||||| ||| | || | |||| || || | |||||||| || |||| Sbjct 15142 TGTTCCAGTCCATTAGGTCGTGAGATAAATCCAGTTCTTCAGCAGTCCAAAATGATGCCT 15201 Query 133424 CGGCTTTTTTGTACAT 133439 | || || |||||||| Sbjct 15202 CCGCCTTCTTGTACAT 15217 >seq181137 Length=58212 Score = 113 bits (124), Expect = 4e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||||||||| |||||||| | || || ||| | | Sbjct 2069 ATGCAGATCTTTGTTAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTGGAGTCTTCG 2010 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | |||| ||| || | ||||| ||||| |||||| | ||||| Sbjct 2009 GATACCATTGACAACG-TGAAAGCAAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCA 1951 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || || || ||||| || |||| || ||| | ||||||||| Sbjct 1950 GCAGCGTCTTATCTTTGCCGGGAAGCAGCTCGAAGACGGCCGTACCTTATCCGACTACAA 1891 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | || || ||| | || || ||| || | || ||| Sbjct 1890 CATCCAGAAGGAGTCTACCCTTCATCTCGTCCTCCGTCTGCGTGGTGGC 1842 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || ||||||||||| || ||||| | || || ||| | | Sbjct 1614 AATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGCTGGAGGTGGAGTCTTC 1555 Query 38303 CGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | || | || |||| ||||| || || ||||| | || | Sbjct 1554 GGACACCATCGACAACG-TGAAGGCGAAGATCCAGGACAAGGAAGGCATTCCTCCTGATC 1496 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || ||||| | ||| || || ||| |||| || | || ||||| || || | Sbjct 1495 AGCAACGTCTCATCTTCGCCGGGAAGCAGTTGGAGGATGGTCGTACCCTTTCGGATTATA 1436 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGG 38451 | ||||| ||||| |||| || ||||||| Sbjct 1435 ATATCCAGAAGGAGTCGACTCTTCATTTGG 1406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499031849573760