Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq179202 141 1e-28 seq175168 116 5e-21 seq180586 102 1e-16 seq176983 95.1 2e-14 seq181834 91.5 2e-13 seq174905 86.0 8e-12 >seq179202 Length=20905 Score = 141 bits (156), Expect = 1e-28 Identities = 274/395 (69%), Gaps = 12/395 (3%) Strand=Plus/Plus Query 7334 GATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTA 7393 || || || | ||| |||||||| || || | || | ||| | |||||||| |||| | Sbjct 7558 GACAATGTCCTCTTGGCGCGCTCGCAGGCACTGCGGAGACGTCTGAGGGCACGGGGGTCA 7617 Query 7394 CCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGAAG-GAGTC 7451 |||| ||||| ||| ||| | || ||||| | |||||| || ||| |||| Sbjct 7618 TCGGAGATATCGAGCTTCGATTTTCTCTTGAACTCGTTCTTGAAGTGGTCCAAGAGAGTG 7677 Query 7452 TCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGA 7511 | ||||||||||||||| ||||| || || || || || || || ||||| | |||| Sbjct 7678 TT--ATCGAAATCTTCACCTCCCAAATGAGTGTCACCGGCAGTGGCCTTGACGGCGAAGA 7735 Query 7512 TACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGA 7571 ||| || ||||| | || || ||||| || || || || || || || || |||| Sbjct 7736 CACCACCGCTGATGTTGAGCAGAGACACATCGAAAGTTCCTCCTCCAAGATCGAAGATGA 7795 Query 7572 GTACGTTCGTATCGTCGTCTTTGTTCTTA---TCGAGACCGTACGCGATAGCCGCCGCCG 7628 | |||||| | || | ||| | | | | || |||||||| || || || || || | Sbjct 7796 GGACGTTCTTCTC--AGCCTTGGAT-TGACGGTCAAGACCGTAGGCAATGGCAGCAGCGG 7852 Query 7629 TTGGTTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTC 7687 | ||||| || || |||| || |||| | ||||| ||||| | | ||||| || || Sbjct 7853 TAGGTTCGTTGATGATACGGAGGACA-TCGAGGCCGGCAATGGCACCGGCATCCTTGGTG 7911 Query 7688 GCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 || || || || ||||| |||||||| ||||| Sbjct 7912 GCCAAACGCTGAGAGTCGTTGAAGTAGGCAGGGAC 7946 >seq175168 Length=26499 Score = 116 bits (128), Expect = 5e-21 Identities = 212/308 (69%), Gaps = 2/308 (1%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 ||||||||||| |||||||| ||||| ||||| ||||| | |||||||| || | |||| Sbjct 11293 TTTTATCAGGCTTCTACATCCGAGCTATACGGCAAAGTCATGGAAACTCCTCAGAGTGAA 11352 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGGCG 22563 | || |||||||||||||| || |||||||| || || | | ||||||| Sbjct 11353 ACAACGCCGTTTTACCCGCGATCGCCATATGGTTGTGCGAAGCTATACGCATATTGGATT 11412 Query 22564 ACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCAC 22623 || |||||||| || | || || ||| || || || || || ||||||||||| Sbjct 11413 GTGGTCAATTATAGGGAGGCGTATGGCGTGTACGCGTGTAACGGGATCTTGTTCAACCAC 11472 Query 22624 GAATCACCGA-GACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAA 22682 ||| || | || ||| ||| | ||||||||| | || || | | | || || | Sbjct 11473 GAAAGCCCAAGGAGAGGGAGAACA-TTCGTGACAAGGAAGATCAGCCGGGCTGCGGCAGA 11531 Query 22683 TATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTG 22742 || | || || ||| ||| |||| || || || | ||||| | || ||||| Sbjct 11532 CATTAAACTGGGAAAGCAAGCATGCCTATATCTCGGAAATGTCGATGCCCAGCGGGATTG 11591 Query 22743 GGGTCATG 22750 ||| |||| Sbjct 11592 GGGACATG 11599 >seq180586 Length=61700 Score = 102 bits (112), Expect = 1e-16 Identities = 114/152 (75%), Gaps = 3/152 (2%) Strand=Plus/Plus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| | |||||||||||| || ||||| || || || ||||| ||||| ||||| Sbjct 17834 GTGTTGTGGGGGTTCATGGCAACCTGATTCTTGGCTGCATCTCCGATGAGACGCTCATTG 17893 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 | | | || | ||||| |||||||| || || || || |||||||| || || || Sbjct 17894 T---CGGAGAAAGAAACGTAGGATGGGGTGGTACGGTTACCCTGGTCGTTGGCGATGATC 17950 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || || ||||||||||| || |||||||| Sbjct 17951 TCAACACGATCGTTTTGCCATACACCGACGCA 17982 >seq176983 Length=31581 Score = 95.1 bits (104), Expect = 2e-14 Identities = 175/256 (68%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| ||||| || || | ||| ||||| || || || || ||| || || | ||| Sbjct 7421 TCGAAGTCTTCTCCTCCGAGGTGCGTATCTCCAGCAGTTGCCAGGACCTCGAAAACACCG 7362 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | || || || || || || ||||| || || || | | || | Sbjct 7361 TCCTCGATGGAGAGTAATGACACGTCGAATGTTCCACCTCCGAGATCGTACACGATGATC 7302 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || | ||| || |||| || | ||||||| || || | ||| || || ||||||||| Sbjct 7301 TTGGATTCGGCGCCTTTTTTGT---CGAGACCATAGGCAAGAGCGGCGGCGGTTGGTTCA 7245 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || | ||||| ||| ||||| || || || |||||||||| || ||||| || Sbjct 7244 TTCATGACGCGAAGGACGTTGAGGCCGGCTATGGTACCCGCATCTTTTGTAGCTTGACGC 7185 Query 7697 TGCGAATCGTTAAAGT 7712 || | ||||| |||| Sbjct 7184 TGGGCGTCGTTGAAGT 7169 >seq181834 Length=52112 Score = 91.5 bits (100), Expect = 2e-13 Identities = 174/256 (68%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||| ||||| | || || || || ||||| || ||| || || | ||| Sbjct 47372 TCGAAATCTTCTCCACCGAGATGGGTGTCACCGGCGGTAGCGAGGACCTCGAATACACCG 47313 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | || ||||| || || |||||||| || || | | || | Sbjct 47312 TCGTCAATGGAGAGGAGGGAGACATCGAAAGTTCCACCACCGAGATCGTAGACGATGATC 47253 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | | ||| | |||| || ||| |||||||| |||||||| || || || || || Sbjct 47252 TGGGACTCGCCACCTTTCTTGTTA---AGACCGTAGGCGATAGCTGCGGCGGTGGGCTCG 47196 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || | |||||||| || || | ||||| || || ||||| || Sbjct 47195 TTGATGATACGGAGGACCTGGAGGCCAGCGATGGTACCGGCATCCTTGGTGGCTTGACGC 47136 Query 7697 TGCGAATCGTTAAAGT 7712 || | ||||| |||| Sbjct 47135 TGAGCGTCGTTGAAGT 47120 >seq174905 Length=21728 Score = 86.0 bits (94), Expect = 8e-12 Identities = 159/230 (69%), Gaps = 5/230 (2%) Strand=Plus/Plus Query 115363 TGCATACCTTCATCTCGACTTATGAGTTCATTACTAAAACATAAACCTGGAAGTAACCCT 115422 ||||| || |||||||| || ||||||||||| ||| ||| || || | | ||| Sbjct 14685 TGCATTCCCTCATCTCGGCTGATGAGTTCATTTGAAAATGTTAAGCCAGGCATGAGCCCC 14744 Query 115423 CTCTTTTTTAACCAAAAAATAGCACAAAAACTACCCGAGAAGAATATACCTTCAACACAC 115482 | ||| |||| |||||| || | | || || |||||||| || ||||| || Sbjct 14745 CGCTTCTTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAGAAGATGCCTTCGACCGCG 14804 Query 115483 GCAAAGGCTAATAAACGTTCAGCAAATGGTCGTTTCTT-ATCA---AACCACTTCATAGC 115538 ||||| || | || ||| ||||||||| || | ||| ||| | |||||| | || Sbjct 14805 GCAAAAGCGACTAGACGCTCAGCAAAT-GTGGAGCCTTCGTCAGATATCCACTTGAGGGC 14863 Query 115539 CCATTTCGCCTTTCTTTCGATACACGGAATTGTTTGAATTGCTTCGAATA 115588 ||||| ||||| | | ||| || |||||||| | || || || |||| Sbjct 14864 CCATTCAGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCGTCAAATA 14913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633683990630760