Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq174905 82.4 9e-11 >seq174905 Length=21728 Score = 82.4 bits (90), Expect = 9e-11 Identities = 307/468 (66%), Gaps = 15/468 (3%) Strand=Plus/Minus Query 101816 TTGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAA 101872 ||||||||||||||| | ||| | || | || | || ||||| | |||||| Sbjct 15191 TTGGACTGCTGAAGAACTGGATTTATCTCACGACCTAATGGACTGGAACAACAATCTAAA 15132 Query 101873 TGAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAAT 101932 || || ||| | || || | ||||||| || |||||||| | || || || || Sbjct 15131 CGACAACGAACGCCATTTTATTTCACACATCCTTGCCTTCTTTGCCGCTTCTGACGGTAT 15072 Query 101933 TGTTTTTGAGAATATCAATAACAACTTTGCTG--ATGAGGTGCAATCCTCTGAAGCGAGA 101990 || ||| ||| | | |||| || || | || || ||| | | ||||| | Sbjct 15071 CGTCAATGAAAATCTTGTT--CAACGTTTCTCCAACGAAGTACAAGTCGCCGAAGCACGC 15014 Query 101991 TCTTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACT 102049 | |||||||| || |||| | || ||| | | || || | ||||| || || Sbjct 15013 TGTTTCTATGGGTTTCAAATT-ATGATGGAGAACGTCCACGCAGAGACCTATTCCCTTCT 14955 Query 102050 CATAGACAAGTATATTAAGGATGGTGCTGAGAAGA-AGCAGCTCTTTGAAGCCATCCAAA 102108 ||| |||| || || ||||| | | |||| || | || ||||| ||||| | | Sbjct 14954 CATCGACACCTACATCAAGGACCCAAATCA-AAGAGAGTATCTATTTGACGCCATAGAGA 14896 Query 102109 CAGTTCCATGTATTCAAAAGAAAG-CGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTC 102166 || |||| || || ||| | ||| | || ||||| | |||||| | | || ||| | Sbjct 14895 CAATTCCTTGCAT-CAAGCGCAAGGCTGAATGGGCCCTCAAGTGGATATCTGACGAAGGC 14837 Query 102167 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226 | | ||||||||||| || |||| ||||| || || || |||||||||||||| Sbjct 14836 TCCA-CATTTGCTGAGCGTCTAGTCGCTTTTGCCGCGGTCGAAGGCATCTTCTTCTCTGG 14778 Query 102227 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGG 102274 || ||| | || | |||| | |||||||| || |||||||| || Sbjct 14777 CTCGTTCGCTTCAATATTTTGGATAAAGAAGCGGGGGCTCATGCCTGG 14730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619326416752080