Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq174905 123 3e-23 seq178594 118 1e-21 >seq174905 Length=21728 Score = 123 bits (136), Expect = 3e-23 Identities = 337/505 (67%), Gaps = 16/505 (3%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAA---GCAAAGTCCAGGCATGAGTCCTCTT 119570 || ||||| || |||||| ||||| |||| | ||| ||||||||||| || | Sbjct 14691 CCCTCATCTCGGCTGATGAGTTCATT--TGAAAATGTTAAG-CCAGGCATGAGCCCCCGC 14747 Query 119571 TTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCG 119630 ||||||| |||||| || | | || ||||| ||||||||||| || || ||| Sbjct 14748 TTCTTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAGAAGATGCCTTCGACCGCGGCA 14807 Query 119631 AAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTT-GTC---GAACCACTTGAGAGCCCA 119686 ||||||| |||||||||||| ||| || ||| ||| ||| | ||||||||| ||||| Sbjct 14808 AAAGCGACTAGACGCTCAGC-AAATGTGGAGCCTTCGTCAGATATCCACTTGAGGGCCCA 14866 Query 119687 GTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTTTTC 119746 | ||||| |||| ||||| || | || | ||||| || || || | || ||| Sbjct 14867 TTCAGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCGTCAAATAGATACTCTCTTTG 14926 Query 119747 AGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATGAACCATTTC 119806 | ||||| || || | || ||||| || |||||||| | || || | || Sbjct 14927 ATTTGGGTCCTTGATGTAGGTGTCGATGAGAAGGGAATAGGTCTCTGCGTGGACGTTCTC 14986 Query 119807 ATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTCGTCAGCAAA 119866 | ||| | |||| || |||| ||||||| | ||| ||||||| | | | Sbjct 14987 CATCATAATTTGAAACCCATAGAAACAGCGTGCTTCGGCGACTTGTACTTCGT-TGGAGA 15045 Query 119867 ATTGTTG-TTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGCTAAGATGT 119925 | |||| | ||||||| || || || || || | || ||||| || | ||||| Sbjct 15046 AACGTTGAACAAGATTTTCATTGACGATACCGTCAGAAGCGGCAAAGAAGGCAAGGATGT 15105 Query 119926 ACTTTATGAATTTCTGTTCATTATCGTT--GAGTGTT-TTCCAGTCGTCCATATCTTTAG 119982 || || | |||| || ||||| || |||| |||||||| | || | || Sbjct 15106 GTGAAATAAAATGGCGTTCGTTGTCGTTTAGATTGTTGTTCCAGTCCATTAGGTCGTGAG 15165 Query 119983 ACAAGTCCACCTCTTCAGCTGTCCA 120007 | || |||| |||||||| ||||| Sbjct 15166 ATAAATCCAGTTCTTCAGCAGTCCA 15190 >seq178594 Length=29560 Score = 118 bits (130), Expect = 1e-21 Identities = 199/282 (71%), Gaps = 7/282 (2%) Strand=Plus/Plus Query 110861 TGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC 110920 |||||||||||| |||||| | || || |||||||| || ||| ||||| || | Sbjct 5684 TGGCACGAATGTTGTGGATGTTCAATCCGATACCACCGGCAGTCTTGCTAATCATGGCGC 5743 Query 110921 A-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAG 110979 | |||| |||| ||| | || |||||||| || || || |||| || | ||| ||| Sbjct 5744 AGCTCT-TGAGAGTATCGTAGATACCATCGATGGAGTCATCCTTCATGCAGACTAGGAAG 5802 Query 110980 CAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATG 111039 || ||||| | || ||| | || || || || ||||| || ||||| | || || || Sbjct 5803 CAGGAAGAGAGTTGCGGATGGGGTGTACCAGCGTTGAACAGGGTAGGCGAGGCGTGTGTG 5862 Query 111040 AACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGT--ACATCTTTACCGT 111097 || || || ||||| |||||| || || || | | ||| | ||| | |||| Sbjct 5863 AAGTAACGTTCTGACATGAGGTTGTAGGTCTCAAGGAC--ATGGTCGATATCATCGCCGT 5920 Query 111098 GAATACCAATGGCAACTCGCATGAACATATATTGA-GGCGTT 111138 | ||||||| ||| || ||||||| ||||| |||| |||||| Sbjct 5921 GGATACCAACGGCCACACGCATGATCATATGTTGAGGGCGTT 5962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587632479484200