Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq178594 102 1e-16 seq174905 102 1e-16 >seq178594 Length=29560 Score = 102 bits (112), Expect = 1e-16 Identities = 150/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 107105 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 107164 ||||| | |||||||| | ||| ||||| ||||| || || |||||||| || Sbjct 5752 AGAGTATCGTAGATACCATCGATGGAGTCATCCTTCATGCAGACTAGGAAGCAGGAAGAG 5811 Query 107165 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 107224 | ||||| ||||||||||| ||||| ||||| || | ||||| |||| || | Sbjct 5812 AGTTGCGGATGGGGTGTACCAGCGTTGAACAGGGTAGGCGAGGCGTGTGTGAAGTAACGT 5871 Query 107225 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATG 107284 | ||||| || ||| ||||| | |||| || || || || |||||||| || | | Sbjct 5872 TCTGACATGAGGTTGTAGGTCTCAAGGACATGGTCGATATCATCGCCGTGGATACCAACG 5931 Query 107285 GCCACACGCATAAACATGTATTG-GGGTGTT 107314 ||||||||||| | ||| | ||| ||| ||| Sbjct 5932 GCCACACGCATGATCATATGTTGAGGGCGTT 5962 >seq174905 Length=21728 Score = 102 bits (112), Expect = 1e-16 Identities = 328/503 (65%), Gaps = 7/503 (1%) Strand=Plus/Plus Query 117292 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTC 117351 |||||||||||| || ||||||||||| || || ||| |||||||| ||||||||| Sbjct 14691 CCCTCATCTCGGCTGATGAGTTCATTTGAAAATGTTAAGCCAGGCATGAGCCCCCGCTTC 14750 Query 117352 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 || | |||| | || | ||| || || ||||||||||| || || || ||||| Sbjct 14751 TTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAGAAGATGCCTTCGACCGCGGCAAAA 14810 Query 117412 GCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA-AACCATTTCATTGCCCATTT 117470 || | || ||||| || || | | ||| ||| || | | ||| || | ||||||| Sbjct 14811 GCGACTAGACGCTCAGCAAATGTG-GAGCCTTCGTCAGATATCCACTTGAGGGCCCATTC 14869 Query 117471 CGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTTTTCAGA 117530 ||||| || || || || | || | ||||| ||||||| | || ||| | Sbjct 14870 AGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCGTCAAATAGATACTCTCTTTGATT 14929 Query 117531 TCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCAT-TTCAT 117589 | ||||| ||||| |||| || | ||||| || || | || || | | ||| Sbjct 14930 TGGGTCCTTGATGTAGGTGTCGATGAGAAGGGAATAGGTCTCTGCGTGGACGTTCTCCAT 14989 Query 117590 TATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGCACTTCATCCGCAAAAT 117649 || |||| | | ||||| |||| |||||| | || ||||| | | ||| Sbjct 14990 CAT-AATTTGAAACCCATAGAAACAGCGTGCTTCGGCGACTTGTACTTCGTTGGAGAAAC 15048 Query 117650 TGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGGATGTACT 117709 | | | ||| ||| || || || || || | |||||||| || ||||||| Sbjct 15049 GTTGAACAAGATTTTCATTGACGATACCGTCAGAAGCGGCAAAGAAGGCAAGGATGTGTG 15108 Query 117710 TTATGAATTTCTTTTCATTTTCATTCAG---GGTCTTCCAGTCGTCAAGATCTTTGGACA 117766 || || | ||| || || || || | | |||||||| || || | || | Sbjct 15109 AAATAAAATGGCGTTCGTTGTCGTTTAGATTGTTGTTCCAGTCCATTAGGTCGTGAGATA 15168 Query 117767 AATCAACTTCTTCCGCAGTCCAA 117789 |||| | |||||| ||||||||| Sbjct 15169 AATCCAGTTCTTCAGCAGTCCAA 15191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588634987422360