Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq181137 161 2e-34 >seq181137 Length=58212 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || ||||| |||||||| ||||| |||||||| | ||| || | ||||||||| Sbjct 1633 ACGAGATGGAGAGTCGACTCTTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCG 1692 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||||||||| |||||||||||||| || ||||| || || || || Sbjct 1693 AGCTGCTTGCCGGCGAAGATAAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGG 1752 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| || || || |||||||| || ||||| || ||||| | |||||| Sbjct 1753 ATCTTCGCCTTCACATTATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATCGTCTTC 1812 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | || || ||||| | ||||| Sbjct 1813 CCTGTGAGGGTCTTGACGAAGATCTGCAT 1841 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 |||||||| ||||| || || ||||| ||||| | ||| || | ||||| || | |||| Sbjct 1411 TGAAGAGTCGACTCCTTCTGGATATTATAATCCGAAAGGGTACGACCATCCTCCAACTGC 1470 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || |||||||| || ||||| || || |||||||||||||| ||||| || || || Sbjct 1471 TTCCCGGCGAAGATGAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTTC 1530 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| ||||| || |||||||||||| ||||| || || || | |||||| || || Sbjct 1531 GCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATCGTCTTGCCCGTG 1590 Query 195118 AAAGTTTTTACGAACACTTGCATT 195141 | || || ||||| | |||||| Sbjct 1591 AGGGTCTTGACGAAGATCTGCATT 1614 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| || ||||| || || || ||||| |||| | || | || |||||| Sbjct 1861 ACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGATAAGGTACGGCCGTCTTCG 1920 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || |||||||| || || |||||||| ||||| || || ||||||||| Sbjct 1921 AGCTGCTTCCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGA 1980 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| || ||||| |||||||| |||||| ||||| ||||| || | ||||| Sbjct 1981 ATCTTTGCTTTCACGTTGTCAATGGTATCCGAAGACTCCACCTCAAGAGTGATGGTCTTG 2040 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 2041 CCCGTGAGGGTCTTAACAAAGATCTGCAT 2069 Score = 87.8 bits (96), Expect = 4e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||||||||| || || || |||||||| | ||||| | ||||| || Sbjct 2312 ACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCCTCA 2371 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||||||| || |||||||| | || || |||||||| || |||| Sbjct 2372 AGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCTGGTGGGATGC 2417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106887476345063