Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq174905 185 1e-41 >seq174905 Length=21728 Score = 185 bits (204), Expect = 1e-41 Identities = 380/559 (68%), Gaps = 7/559 (1%) Strand=Plus/Plus Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020 || || ||||| ||| | |||||| |||| || || | |||||| ||||||||||| Sbjct 14670 CAGGCGAAATCGGTATGCATTCCCTCATCTCGGCTGATGAGTTCATTTGAAAATGTTAAG 14729 Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080 |||||||| || || | || |||| ||| ||||| ||||| || || ||||| ||||| Sbjct 14730 CCAGGCATGAGCCCCCGCTTCTTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAGAAG 14789 Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA 19140 || ||||| || || |||||||| ||||| | || || || | | | || | || Sbjct 14790 ATGCCTTCGACCGCGGCAAAAGCGACTAGACGCTCAGCA-AATGTGGAGCCTTCGTCAGA 14848 Query 19141 -ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATT 19199 ||||| || || ||||| |||||||| || | || || ||||||||||| | | Sbjct 14849 TATCCACTTGAGGGCCCATTCAGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCGTC 14908 Query 19200 AAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACAT 19259 |||||||||| | | || || || || | || | || || | | || | Sbjct 14909 AAATAGATACTCTCTTTGATTTGGGTCCTTGATGTAGGTGTCGATGAGAAGGGAATAGGT 14968 Query 19260 TTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTAT 19319 |||| || | || || || || ||||| || || ||||| | |||||| | | Sbjct 14969 CTCTGCGTGGACGTTCTCCATCATAATTTGAAACCCATAGAAACAGCGTGCTTCGGCGAC 15028 Query 19320 CTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGC 19379 |||||||| | | || | || || | ||||||||| || || || ||| ||| || Sbjct 15029 TTGTACTTCGTTGGAGAAACGTTGAACAAGATTTTCATTGACGATACCGTCAGAAGCGGC 15088 Query 19380 AAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTT---AATG-TATTCC 19435 ||| || || | | ||| ||||||||| ||| | || ||| | || | |||| Sbjct 15089 AAAGAAGGCAAGGATGTGTGAAATAAAATGGCGTTCGT-TGTCGTTTAGATTGTTGTTCC 15147 Query 19436 AATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTT 19495 | || | | || | ||||||||| | ||||||| | |||||||| || ||||| || | Sbjct 15148 AGTCCATTAGGTCGTGAGATAAATCCAGTTCTTCAGCAGTCCAAAATGATGCCTCCGCCT 15207 Query 19496 TTTTATACATGTTCCATAT 19514 | || ||||| | ||| || Sbjct 15208 TCTTGTACATCTGCCAGAT 15226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560826566589960