Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq181137 86.0 5e-11 >seq181137 Length=58212 Score = 86.0 bits (94), Expect = 5e-11 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| || |||||||||||| || || || ||||| || | || || | Sbjct 1852 AGACGGAGGACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGATAAGGTACGG 1911 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||| || || || |||||||| ||||| | ||||| || || ||||| || || Sbjct 1912 CCGTCTTCGAGCTGCTTCCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCC 1971 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 || |||||||| ||| ||| || ||||| ||||| | || | || || ||||| Sbjct 1972 TTGTCTTGAATCTTTGCTTTCACGTTGTCAATGGTATCCG-AAGACTCCACCTCAAGAGT 2030 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || || || || ||||| || || ||||| Sbjct 2031 GATGGTCTTGCCCGTGAGGGTCTTAACAAAGATCTGCAT 2069 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4019645158654610