Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq174905 127 2e-24 >seq174905 Length=21728 Score = 127 bits (140), Expect = 2e-24 Identities = 344/524 (66%), Gaps = 3/524 (1%) Strand=Plus/Plus Query 37176 CATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAAT 37235 || || ||||| ||| | || ||||||| || || | |||||| ||||| ||||| Sbjct 14670 CAGGCGAAATCGGTATGCATTCCCTCATCTCGGCTGATGAGTTCATTTGAAAATGTTAAG 14729 Query 37236 CCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAA 37295 || ||||| | || | || || ||||||||||||| || || || ||||| ||||| Sbjct 14730 CCAGGCATGAGCCCCCGCTTCTTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAGAAG 14789 Query 37296 ATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAA 37355 || ||||| || || ||||| || || ||||| | | || || || | | ||||| Sbjct 14790 ATGCCTTCGACCGCGGCAAAAGCGACTAGACGCTCAGCAAATGTGGAGCCTTCGTCAGAT 14849 Query 37356 ATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTT 37415 ||||| || | ||| || ||||| || | || |||||| || || || | Sbjct 14850 ATCCACTTGAGGGCCCATTCAGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCGTCA 14909 Query 37416 AAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATT 37475 || ||| | | | ||| | || | || || || || || || | ||| | Sbjct 14910 AATAGATACTCTCTTTGATTTGGGTCCTTGATGTAGGTGTCGATGAGAAGGGAATAGGTC 14969 Query 37476 TCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAAT 37535 || | ||| | || || || || ||||| ||||| ||||| | ||||| | | | Sbjct 14970 TCTGCGTGGACGTTCTCCATCATAATTTGAAACCCATAGAAACAGCGTGCTTCGGCGACT 15029 Query 37536 TGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCA 37595 || || ||||| | || | | | | | |||||||| || || || ||| ||| ||| Sbjct 15030 TGTACTTCGTTGGAGAAACGTTGAACAAGATTTTCATTGACGATACCGTCAGAAGCGGCA 15089 Query 37596 AAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAT--TTGATAAT-TTTTTCCAA 37652 ||||| ||||| | | | |||||||| | ||| | | || | | | || ||||| Sbjct 15090 AAGAAGGCAAGGATGTGTGAAATAAAATGGCGTTCGTTGTCGTTTAGATTGTTGTTCCAG 15149 Query 37653 TCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696 || | | || | |||||||| | ||| ||| | |||||||| Sbjct 15150 TCCATTAGGTCGTGAGATAAATCCAGTTCTTCAGCAGTCCAAAA 15193 Score = 120 bits (132), Expect = 4e-22 Identities = 277/415 (67%), Gaps = 2/415 (0%) Strand=Plus/Minus Query 37196 ACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttt 37255 ||| ||||| | ||| || | || || || ||||| || || ||||| | || | || Sbjct 16841 ACCCTCATCGCGACTGATGAGCTCGTTGGAGAAGGTCAAGCCGGGCATCATTCCACGCTT 16782 Query 37256 tttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAA 37315 || ||||| || || | ||| || || |||||||||||||| || ||||| || ||||| Sbjct 16781 CTTCATCCAGAAGATGGATGCGAACGACCCAGAAAAGAAAATCCCCTCAACGGCGGCAAA 16722 Query 37316 TGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATC 37375 || ||||| ||| ||||||||| ||||| | || || ||||| || | ||| || Sbjct 16721 GGCGACAAGGCGTTCACCGAAAGTGGAACTCTGGTCGGAGATCCACTTGAGGGCCCAGTC 16662 Query 37376 TGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTC 37435 ||||| ||| | || ||| ||||||| || | || || |||| || | Sbjct 16661 AGCCTTGCGTTTGATGCAGGGAATGGTTTCAACAGCGTCGAACAGGAAGTCGCGTTGAGC 16602 Query 37436 ACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAAT 37495 ||| | || || || || || || | | || |||| ||||| || ||||| || Sbjct 16601 GGGCTCTTTGATGTACGTGTCGATGAGGAGAGAGTAGGTTTCGGAGTGGATGTTTTCCAT 16542 Query 37496 AGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCT 37555 ||||| || ||||| || || | ||| || | ||| || || | || | Sbjct 16541 CATAATCTGGAAGCCATAGAAGCAACGAGCCTCGGCGGCTTGTACTTCACCGGAGAAGC- 16483 Query 37556 CTTAGCTAA-GTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAAC 37609 || | || ||||||||| || || || ||| || || |||||||| ||||| Sbjct 16482 GTTCGAGAAGGTTTTCATTGACGATACCGTCAGACGCCGCGAAGAAAGCGAGAAC 16428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590965658743560