Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq181137 96.9 3e-15 >seq181137 Length=58212 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 48559 CCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCA 48618 ||||||| || || ||| || || ||||| ||||| || || | ||| | || |||| Sbjct 1406 CCAAATGAAGAGTCGACTCCTTCTGGATATTATAATCCGAAAGGGTACGACCATCCTCCA 1465 Query 48619 ACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAA 48678 ||||||| ||||| || || || || || ||||| | |||| ||| |||||||| | Sbjct 1466 ACTGCTTCCCGGCGAAGATGAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGA 1525 Query 48679 TCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTC 48738 |||| || || | | | || || | ||||||||||| ||| ||||| || | Sbjct 1526 TCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATCGTCTTGC 1585 Query 48739 CCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| | || || || || |||||||| Sbjct 1586 CCGTGAGGGTCTTGACGAAGATCTGCAT 1613 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || || || ||||| || |||| | || |||| || | |||||| |||||||| Sbjct 1878 CTCCTTCTGGATGTTGTAGTCGGATAAGGTACGGCCGTCTTCGAGCTGCTTCCCGGCAAA 1937 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || || ||||| || || | ||||| ||||||||||| ||||||| ||| || Sbjct 1938 GATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGAATCTTTGCTTTCACGTT 1997 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || || | ||||||||| | || || || || ||||| | || || || Sbjct 1998 GTCAATGGTATCCGAAGACTCCACCTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAAC 2057 Query 48755 AAAAATCTGCAT 48766 ||| |||||||| Sbjct 2058 AAAGATCTGCAT 2069 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||| ||||| ||||||||||| || | || | || || | |||||| ||||| || Sbjct 1650 CTCTTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAA 1709 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || || || ||||| || | ||| | ||||||||| || ||||| || ||| Sbjct 1710 GATAAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTCGCCTTCACATT 1769 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | | || || | ||||||||| | || ||||| || || || | || || || Sbjct 1770 ATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATCGTCTTCCCTGTGAGGGTCTTGAC 1829 Query 48755 AAAAATCTGCAT 48766 || |||||||| Sbjct 1830 GAAGATCTGCAT 1841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380090362516947