Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq174905 172 1e-37 >seq174905 Length=21728 Score = 172 bits (190), Expect = 1e-37 Identities = 375/559 (67%), Gaps = 7/559 (1%) Strand=Plus/Plus Query 48122 TAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAG 48181 || || | |||||| || || | |||| || || || ||||||||||| | || || Sbjct 14661 TATAGGAGGCAGGCGAAATCGGTATGCATTCCCTCATCTCGGCTGATGAGTTCATTTGAA 14720 Query 48182 AAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCA 48241 || | |||||||||| ||||| || || | ||| || |||| ||||| |||||| Sbjct 14721 AATGTTAAGCCAGGCATGAGCCCCCGCTTCTTTATCCAAAATATTGAAGCGAACGAGCCA 14780 Query 48242 GAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAA--AGAAGCGT 48299 |||||||||||||| || || || || || ||| || | ||| | || | ||| | Sbjct 14781 GAGAAGAAGATGCCTTCGACCGCGGCAAAAGCGACTAGACGCTCAGCAAATGTGGAGCCT 14840 Query 48300 TCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCT 48359 || ||| || ||||| || ||||| || ||||| ||||||||| || || |||| Sbjct 14841 TC--GTCAGATATCCACTTGAGGGCCCATTCAGCCTTGCGCTTGATGCAAGGAATTGTCT 14898 Query 48360 CTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCT 48419 ||||||| || || | || | | | || |||| | ||||| || || Sbjct 14899 CTATGGCGTCAAATAGATACTCTCTTTGATTTGGGTCCTTGATGTAGGTGTCGATGAGAA 14958 Query 48420 TTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGG 48479 | || |||| | ||| || ||||| || || || ||||| ||||| | | Sbjct 14959 GGGAATAGGTCTCTGCGTGGACGTTCTCCATCATAATTTGAAACCCATAGAAACAGCGTG 15018 Query 48480 CCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCAT 48539 | || || || ||||| ||||||| | | | ||||| |||||||| || || | Sbjct 15019 CTTCGGCGACTTGTACTTCGTTGGAGAAACGTTGAACAAGATTTTCATTGACGATACCGT 15078 Query 48540 CTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA- 48598 | ||||| |||||||||||||||| ||| || |||||||| ||||||| | | ||| Sbjct 15079 CAGAAGCGGCAAAGAAGGCAAGGATGTGTGAAATAAAATGGCGTTCGTTGTCGTTTAGAT 15138 Query 48599 --GCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACG 48656 |||||| || || ||| | | |||| |||||| ||||||| || || | Sbjct 15139 TGTTGTTCCAGTCCATTAGGTCGTGAGATAAATCCAGTTCTTCAGCAGTCCAAAATGATG 15198 Query 48657 CGAGTGCTTTTTTGTACAT 48675 | || || |||||||| Sbjct 15199 CCTCCGCCTTCTTGTACAT 15217 Score = 149 bits (164), Expect = 1e-30 Identities = 364/550 (66%), Gaps = 5/550 (1%) Strand=Plus/Minus Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 |||||| ||||| |||||| || || || || ||||||||| ||||||||||| | Sbjct 16862 GCAGGCGAAGTCGGTGTGCATACCCTCATCGCGACTGATGAGCTCGTTGGAGAAGGTCAA 16803 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 || ||||| | || | || || | |||||| || | ||||| || ||||| ||||| Sbjct 16802 GCCGGGCATCATTCCACGCTTCTTCATCCAGAAGATGGATGCGAACGACCCAGAAAAGAA 16743 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 || ||||| || || || || ||| || | || ||||||| | ||| ||| || Sbjct 16742 AATCCCCTCAACGGCGGCAAAGGCGACAAGGCGTTCACCGAAAGTGGAACTCTGGTCGGA 16683 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369 |||||| || |||||||| ||||| |||||||| || || || || | || Sbjct 16682 GATCCACTTGAGGGCCCAGTCAGCCTTGCGTTTGATGCAGGGAATGGTTTCAACAGCGTC 16623 Query 48370 GAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACAT 48429 ||| || | || | | | | || | || || || || | ||| | Sbjct 16622 GAACAGGAAGTCGCGTTGAGCGGGCTCTTTGATGTACGTGTCGATGAGGAGAGAGTAGGT 16563 Query 48430 CTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACAC 48489 || ||||| | || || || |||||||| || |||||| | ||||| | Sbjct 16562 TTCGGAGTGGATGTTTTCCATCATAATCTGGAAGCCATAGAAGCAACGAGCCTCGGCGGC 16503 Query 48490 CTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGC 48549 || ||||| |||||| | || || || || |||||||| || || || || || || Sbjct 16502 TTGTACTTCACCGGAGAAGCGTTCGAGAAGGTTTTCATTGACGATACCGTCAGACGCCGC 16443 Query 48550 AAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTCC 48605 ||||| || || || ||| || ||| ||||||||||||| | | || || |||| Sbjct 16442 GAAGAAAGCGAGAACGTGTGAAATGAAGTGGCGCTCGTTGTCGTTCAG-GCGGTTGTTCC 16384 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || | || | || || || |||| ||||| | |||||||| ||||| |||| Sbjct 16383 AGTCATGAAGATCCTTCGAGAGATCCATCTCTTCAGCTGTCCAGAACGACGCCTCCGCTT 16324 Query 48666 TTTTGTACAT 48675 | |||||||| Sbjct 16323 TCTTGTACAT 16314 Score = 93.3 bits (102), Expect = 8e-14 Identities = 130/180 (72%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 47858 TTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTG 47917 ||||| |||||||| ||||| |||| | |||||| | ||||||||| |||||||||| Sbjct 17181 TTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATGTCCATGAAGTCGAAGGGGTTG 17122 Query 47918 GGTGTGTTATACACCCGTGTCA-GGCCCATCTGTTCCAGCAGGTGATCCGCGACGTACTC 47976 | | ||| || | || ||||| ||||| | | ||||| | || || ||| |||| Sbjct 17121 GTGGAGTTGTAGA-CCTTGTCATTGCCCAGAGATACAAGCAGACGGTCGGCAACGAACTC 17063 Query 47977 GATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGT 48036 |||||| | ||||||| | |||||||| |||||| ||||| | ||| | ||| Sbjct 17062 GATGTACTGGCACATGAGCTTAGCATTCATGCCGATGAGGCTGACGGGAAGAGCATCTGT 17003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 929407868885760