Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq174905 147 4e-30 seq178594 109 1e-18 >seq174905 Length=21728 Score = 147 bits (162), Expect = 4e-30 Identities = 375/566 (66%), Gaps = 15/566 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| ||||||||||||| || | || |||||| || |||||||| ||||| Sbjct 16305 ATCTGGCAGATGTACAAGAAAGCGGAGGCGTCGTTCTGGACAGCTGAAGAGATGGATCTC 16364 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTT--TCTC 25590 | ||||| | | | |||| || || | | | | |||||| || || | || Sbjct 16365 TCGAAGGATCTTCATGACTGGAACAACCGCCTGAACGACA-ACGAGCGCCACTTCATTTC 16423 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 | |||| | || ||||| || || ||||| ||||| || || || || || ||| Sbjct 16424 AC--ACGTTCTCGCTTTCTTCGCGGCGTCTGACGGTATCGTCAATGAAAACCTTCTCGAA 16481 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | ||| || | ||||| || || ||||| || ||||| || |||||||| Sbjct 16482 CGCTTCTCCGGTGAAGTACAAGCCGCCGAGGCTCGTTGCTTCTATGGCTTCCAGATTATG 16541 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGAC 25767 || ||||| | ||||| || || | || || || |||||||| | ||| Sbjct 16542 ATGGAAAACATCCACTCCGAAACCTACTCT---CTCCTCATCGACACGTACATCAAAGAG 16598 Query 25768 GTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827 ||| | | || ||||| | || | || ||| ||| ||||||| | ||| Sbjct 16599 CCCGCTCAACGCGACTTCCTGTTCGACGCTGTTGAAACCATTCCCTGCATCAAACGCAAG 16658 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTA 25887 || |||||| | ||||||||| | |||||| | || || || || || || || Sbjct 16659 GCTGACTGGGCCCTCAAGTGGATCTCCGACCAGAGTTCCACTTTCGGTGAACGCCTTGTC 16718 Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947 |||||||| || || ||||| || || || || ||||| || ||||||||||| | Sbjct 16719 GCCTTTGCCGCCGTTGAGGGGATTTTCTTTTCTGGGTCGTTCGCATCCATCTTCTGGATG 16778 Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 ||| || || | |||||||| || ||| ||||||||||||||||| | || ||| Sbjct 16779 AAGAAGCGTGGAATGATGCCCGGCTTGACCTTCTCCAACGAGCTCATCAGTCGCGATGAG 16838 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCT 26033 ||| | |||| || || |||||||| Sbjct 16839 GGTATGCACACCGACTTCGCCTGCCT 16864 >seq178594 Length=29560 Score = 109 bits (120), Expect = 1e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 222044 AAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCG 222103 || || || || |||||||| || | ||| | ||| | | || ||||||| |||| Sbjct 5390 AAAAGATCAGGAATCCACAGTGCGTAAAACAAATCACGAGCGCGAGACTCCTCCTTGCCG 5449 Query 222104 TTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACG 222163 | ||| ||||||||||| | ||||| |||| || || ||||| ||||| || |||| | Sbjct 5450 TGGTTCTTCCTCAGATCGAGGAACTCGAAAACATCCGCATGCCATGGCTCGAGGTAGATG 5509 Query 222164 GCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCAC 222201 || | ||| ||||| |||||||||||||| ||||| || Sbjct 5510 GCGAAAGCTCCGGGACGCTTGTTGCCACCTTGATCAAC 5547 Score = 93.3 bits (102), Expect = 8e-14 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 222311 CCGATACCACCGGC-GTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCC 222369 |||||||||||||| || || | | ||||||||||||||||||||||| || ||| || Sbjct 5710 CCGATACCACCGGCAGTCTTGCTA-ATCATGGCGCAGCTCTTGAGAGTATCGTAGATACC 5768 Query 222370 CTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTG-AGATTTGGTGG 222428 || || ||||| ||||| | | | || || || || || | || ||| |||| Sbjct 5769 ATCGATGGAGTCATCCTTCATGCAGACTAGGAAGCAGGAAGAGAGTTGCGGATGGGGTGT 5828 Query 222429 AACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGT 222488 | || ||||| ||||| || || ||||||||| ||||| | ||||| || | || Sbjct 5829 ACCA-GCGTTGAACAGGGTAGGCGAGGCGTGTGTGAAGTAACGTTCTGACATGAGGTTGT 5887 Query 222489 ACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAAT 222525 | ||||| | ||| | |||| | || ||||| || Sbjct 5888 AGGTCTCAAGGACATGGTCGATATCATCGCCGTGGAT 5924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 926726000516160