Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq174905 102 1e-16 seq178594 89.7 6e-13 >seq174905 Length=21728 Score = 102 bits (112), Expect = 1e-16 Identities = 328/503 (65%), Gaps = 7/503 (1%) Strand=Plus/Minus Query 64713 TTGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACC---CTGAA 64769 ||||||||| |||||| | ||||| || | || || |||||||| | | || || Sbjct 15191 TTGGACTGCTGAAGAACTGGATTTATCTCACGACCTAATGGACTGGAACAACAATCTAAA 15132 Query 64770 TGAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAAT 64829 || || ||| | || || ||||||| || |||||||| | || || || || Sbjct 15131 CGACAACGAACGCCATTTTATTTCACACATCCTTGCCTTCTTTGCCGCTTCTGACGGTAT 15072 Query 64830 TGTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889 || ||| ||| | | | ||| | | ||||| || | |||||| |||| Sbjct 15071 CGTCAATGAAAATCTTGTTCAACGTTTCTCCAACGAAGTACAAGTCGCCGAAGCACGCTG 15012 Query 64890 ATTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTGA 64948 ||||| | | |||| || ||| | | || || | || || ||||| | | Sbjct 15011 TTTCTATGGGTTTCAAATT-ATGATGGAGAACGTCCACGCAGAGACCTATTCCCTTCTCA 14953 Query 64949 TTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTGAAGCCATCCAAACTG 65008 | |||| ||||| ||||| | | ||| || | ||||||| ||||| | || Sbjct 14952 TCGACACCTACATCAAGGACCCAAATCAAAGAGAGTATCTATTTGACGCCATAGAGACAA 14893 Query 65009 TACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTT-TGACACAAAGTCTCGC 65067 | || || || || ||||| ||||||| | || ||| | | || ||| ||| | Sbjct 14892 TTCCTTGCATCAAGCGCAAGGCTGAATGGGCCCTCAAGTGGATATCTGACGAAGGCTC-C 14834 Query 65068 TCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA 65127 | || || ||||| || | || ||||| || || || ||||||||||| || || Sbjct 14833 ACATTTGCTGAGCGTCTAGTCGCTTTTGCCGCGGTCGAAGGCATCTTCTTCTCTGGCTCG 14774 Query 65128 TTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAAT 65187 ||| | || | |||| | ||||||||||| |||||||| ||| || || |||||| Sbjct 14773 TTCGCTTCAATATTTTGGATAAAGAAGCGGGGGCTCATGCCTGGCTTAACATTTTCAAAT 14714 Query 65188 GAACTTATTTCCCGAGATGAGGG 65210 ||||| || |||||||||||| Sbjct 14713 GAACTCATCAGCCGAGATGAGGG 14691 >seq178594 Length=29560 Score = 89.7 bits (98), Expect = 6e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 75221 ATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACA 75280 ||| ||||||| || || | || |||||||| || || || || |||| | ||||| Sbjct 5948 ATGATCATGCGTGTGGCCGTTGGTATCCACGGCGATGATATCGACCATGTCCTTGAGACC 5889 Query 75281 TACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGT 75340 ||| || ||||| || || |||| ||||| | || ||||| ||||| |||||| Sbjct 5888 TACAACCTCATGTCAGAACGTTACTTCACACACGCCTCGCCTACCCTGTTCAACGCTGGT 5829 Query 75341 ACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAAC 75400 ||||| ||||| | || |||||||| || || ||||| ||||| ||| | Sbjct 5828 ACACCCCATCCGCAACTCTCTTCCTGCTTCCTAGTCTGCATGAAGGATGACTCCATCGAT 5769 Query 75401 GGTATCTATGGAACTCT 75417 |||||||| | ||||| Sbjct 5768 GGTATCTACGATACTCT 5752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595208757628320