Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq177515 96.9 1e-14 seq174905 91.5 4e-13 seq182458 87.8 5e-12 >seq177515 Length=17638 Score = 96.9 bits (106), Expect = 1e-14 Identities = 184/268 (69%), Gaps = 6/268 (2%) Strand=Plus/Plus Query 302554 TCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTT 302613 ||||||| | ||| | ||| |||| | ||| | || |||||||||||| ||||| || Sbjct 6411 TCATAACACACCATGACGTCCTCCAAAGCCTTCACTAGACGACGCTGAATGTAACCCGTC 6470 Query 302614 GTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAAT 302673 | || || || || |||||||| ||||| | || ||| ||||||| |||||||| Sbjct 6471 TCTGCAGTCTTGACCGCAGTATCAATGAGACCCTCCCGCCCAGCCATAGCGTGGAAGAAG 6530 Query 302674 AGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTC-GGG 302732 | || | |||| || || | || | | ||| |||| ||||| || || || || ||| Sbjct 6531 AATTCCTGCGGTGTCAGTCCGCGAAGATACGAGTTCTCCACGAACCCGCGAGCTTCTGGG 6590 Query 302733 C--GAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATA 302790 | ||||||| ||| || || || |||| |||| | | ||| | |||||| Sbjct 6591 CTGAAATCGTC---CTTCGTGAAATGAGGCAACGTCCGATGACGGAAACCGAAGGGGATA 6647 Query 302791 CGCTTTCCATCAACGTTCTGCTGTCCCA 302818 || || || || ||||||| |||| Sbjct 6648 CGACGACCTTCCACACTCTGCTGCCCCA 6675 >seq174905 Length=21728 Score = 91.5 bits (100), Expect = 4e-13 Identities = 246/372 (66%), Gaps = 6/372 (2%) Strand=Plus/Plus Query 133289 GGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAAT 133348 || ||||| ||| ||||| || ||| ||| ||||| | |||||| ||||||||| Sbjct 16491 GGTGAAGTACAAGCCGCCGAGGCTCGTTGCTTCTATGGCTTCCAGATTATGATGGAAAAC 16550 Query 133349 ATCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAG 133408 ||||| || || || ||| || || || || ||||||||||| ||| || | | Sbjct 16551 ATCCACTCCGAAACCTACTCTCTCCTCATCGACACGTACATCAAAGAGCCCGCTCA-ACG 16609 Query 133409 C-ACAAACTATTCAACGCCATT--AGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGG 133465 | || || ||| |||| || | | | |||| || || ||| || |||||||| Sbjct 16610 CGACTTCCTGTTCGACGCTGTTGAAACCA--TTCCCTGCATCAAACGCAAGGCTGACTGG 16667 Query 133466 GCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCT 133525 || | || |||||| ||| || || | | ||| | | || || || || ||||| Sbjct 16668 GCCCTCAAGTGGATCTCCGACCAGAGTTCCACTTTCGGTGAACGCCTTGTCGCCTTTGCC 16727 Query 133526 GTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGT 133585 | || ||||| ||||| || ||| ||||| || || || ||| | || |||||| Sbjct 16728 GCCGTTGAGGGGATTTTCTTTTCTGGGTCGTTCGCATCCATCTTCTGGATGAAGAAGCGT 16787 Query 133586 GGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCAC 133645 || || | || || || || || ||||| || || | || |||| | ||| Sbjct 16788 GGAATGATGCCCGGCTTGACCTTCTCCAACGAGCTCATCAGTCGCGATGAGGGTATGCAC 16847 Query 133646 ACCGAATTTGCC 133657 ||||| || ||| Sbjct 16848 ACCGACTTCGCC 16859 Score = 86.0 bits (94), Expect = 2e-11 Identities = 358/559 (64%), Gaps = 7/559 (1%) Strand=Plus/Minus Query 133104 AGATTTGGCAGATGTATAAAAAACAGCAAGATTTATTTTGGACTTCAACTGAAGTAGATT 133163 |||| ||||||||||| || || | | | | |||||||||| | ||| | |||| Sbjct 15228 AGATCTGGCAGATGTACAAGAAGGCGGAGGCATCATTTTGGACTGCTGAAGAACTGGATT 15169 Query 133164 TATCCAAAGACCCAGCCCACTGGGAAGCC---CTTACTGGGGATGAAAAACATTTTATTT 133220 |||| | |||| | ||||| | | || | | | ||| |||||||||| Sbjct 15168 TATCTCACGACCTAATGGACTGGAACAACAATCTAAACGACAACGAACGCCATTTTATTT 15109 Query 133221 CTATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAGGAACAC 133280 | || | || || ||||| || ||| ||||| || ||||||| | | || Sbjct 15108 CACACATCCTTGCCTTCTTTGCCGCTTCTGACGGTATCGTCAATGAAAATCT-TGTTCAA 15050 Query 133281 GGTTTATGGGA-GAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCG 133339 |||| | | ||||| ||| | |||||||| || || |||||| | || ||| | Sbjct 15049 CGTTTCTCCAACGAAGTACAAGTCGCCGAAGCACGCTGTTTCTATGGGTTTCAAATTATG 14990 Query 133340 ATGGAAAATATCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACC 133399 ||||| || |||| | || ||||| ||| || || || |||||||| || | Sbjct 14989 ATGGAGAACGTCCACGCAGAGACCTATTCCCTTCTCATCGACACCTACATCAAGGACCCA 14930 Query 133400 GTCCAGAAGCACAAACTATTCAACGCCATTAGCGA-ATTTCCTTGTATTAAAAAGAAATC 133458 || | | | ||||| |||||| ||| || | ||||||| || || || | Sbjct 14929 AATCAAAGAGAGTATCTATTTGACGCCA-TAGAGACAATTCCTTGCATCAAGCGCAAGGC 14871 Query 133459 TGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGC 133518 ||| ||||| | || ||||| ||| | | | | |||||| ||||| || || Sbjct 14870 TGAATGGGCCCTCAAGTGGATATCTGACGAAGGCTCCACATTTGCTGAGCGTCTAGTCGC 14811 Query 133519 TTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAA 133578 |||||| | || || ||||| || ||| ||| ||||| || || |||||| | || Sbjct 14810 TTTTGCCGCGGTCGAAGGCATCTTCTTCTCTGGCTCGTTCGCTTCAATATTTTGGATAAA 14751 Query 133579 AAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGC 133638 ||||| || | | ||||| | ||||| || ||||| || | || |||| Sbjct 14750 GAAGCGGGGGCTCATGCCTGGCTTAACATTTTCAAATGAACTCATCAGCCGAGATGAGGG 14691 Query 133639 ACTTCACACCGAATTTGCC 133657 | | || ||||| || ||| Sbjct 14690 AATGCATACCGATTTCGCC 14672 >seq182458 Length=17051 Score = 87.8 bits (96), Expect = 5e-12 Identities = 123/170 (72%), Gaps = 6/170 (4%) Strand=Plus/Minus Query 251821 AAAAGTGTCTCTTTCAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATG 251880 ||||| ||| ||| ||| ||||||||||||| || ||||| || ||||||||| Sbjct 3936 AAAAGACACTCGATCAAATGGCCGATAGTCATACGGGACGGGATAGCGTGAGGATTGATG 3877 Query 251881 ATGATGTCGGGTTTCAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATA-ATG 251937 ||||| ||||| | ||| || || ||||| ||||| ||| |||| | ||| || Sbjct 3876 ATGATATCGGGAACGATTCCCTCCGCCGTGAAAGGCATGTCC---TCCTGGCGATATGTG 3820 Query 251938 TTTCCAATAGTTCCCTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 | || | ||| ||||| || ||||||||||| ||||| ||||| || Sbjct 3819 ATACCGACAGTACCCTTCTGCCCGTGACGAGACGCAAACTTGTCACCGAT 3770 Score = 86.0 bits (94), Expect = 2e-11 Identities = 121/165 (73%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 251487 ACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGC 251546 ||| || ||||||||||||||||| ||||| || ||||| || |||||||| || ||| Sbjct 4270 ACCATGCGAAATCATACAATCACGTTCCATCTCTCCGAATCGCAGACCACCGTCACGACT 4211 Query 251547 CCTACCCTCGGCAGGCTGACGAGT-GAGAT-TAACCATAGGACCGATGGAGCGGCTATGT 251604 |||||||| ||||||| | || |||| | | | ||||| | | || ||| Sbjct 4210 TCTACCCTCCACAGGCTGCCTCGTCAAGATCTGA--ACGGGACCTCTCGCTCGAGAATGA 4153 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATG-CGGG 251648 ||| |||| |||||| ||||| || |||||||| ||| |||| Sbjct 4152 ATCTTGTCATCTACCATGTGCTTTAGGCGCTGGTAATATGTCGGG 4108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1468376283936793