Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq174905 129 7e-24 seq178594 87.8 2e-11 >seq174905 Length=21728 Score = 129 bits (142), Expect = 7e-24 Identities = 127/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 868709 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 868768 || ||| |||||| |||||||||||||||| ||||||||||| ||||| | ||| Sbjct 17187 ACACGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATGTCCATGAAGTCGAAG 17128 Query 868769 GGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACA 868828 ||||||| | |||||| ||| || || || || | ||||| |||||||| || Sbjct 17127 GGGTTGGTGGAGTTGTAGACCTTGTCATTGCCCAGAGATACAAGCAGACGGTCGGCAACG 17068 Query 868829 AACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAG 868872 ||||||||||||||||||||||| || |||||||||||||| Sbjct 17067 AACTCGATGTACTGGCACATGAGCTTAGCATTCATGCCGATGAG 17024 Score = 120 bits (132), Expect = 4e-21 Identities = 203/292 (70%), Gaps = 3/292 (1%) Strand=Plus/Plus Query 869172 TATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGC 869231 ||||| || || || || ||||| | ||| || ||| | | ||| |||||||| | Sbjct 14683 TATGCATTCCCTCATCTCGGCTGATGAGTTCATTTGAAAATGTTAAGCCAGGCATGAGCC 14742 Query 869232 CGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGG 869291 | |||||||| | |||||| || | ||| ||| ||||| |||||||| ||||| | Sbjct 14743 CCCGCTTCTTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAGAAGATGCCTTCGACCG 14802 Query 869292 CGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCA 869351 ||||||| ||| || ||||| ||||| ||| ||| || || | |||||||| | Sbjct 14803 CGGCAAAAGCGACTAGACGCTCAGCAAATGTG--GAG-CCTTCGTCAGATATCCACTTGA 14859 Query 869352 TCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGT 869411 ||||| || ||||| | | | | || | || || |||||| ||| || | | Sbjct 14860 GGGCCCATTCAGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCGTCAAATAGATACT 14919 Query 869412 CCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | ||| |||||||||| ||||||||||| || || ||||||||||| Sbjct 14920 CTCTTTGATTTGGGTCCTTGATGTAGGTGTCGATGAGAAGGGAATAGGTCTC 14971 Score = 89.7 bits (98), Expect = 6e-12 Identities = 192/285 (67%), Gaps = 3/285 (1%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| || ||||||||||| | |||||| |||| | ||||||||| | || ||||| Sbjct 16841 ACCCTCATCGCGACTGATGAGCTCGTTGGAGAAGGTCAAGCCGGGCATCATTCCACGCTT 16782 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| | ||| ||||||| ||| || || || || || ||||| ||||||||||| Sbjct 16781 CTTCATCCAGAAGATGGATGCGAACGACCCAGAAAAGAAAATCCCCTCAACGGCGGCAAA 16722 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | ||| || || || | || ||| || | || | | ||||||||| | ||||| Sbjct 16721 GGCGACAAGGCGTTCACCGAAAGTG--GA-ACTCTGGTCGGAGATCCACTTGAGGGCCCA 16665 Query 869359 GTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTC 869418 ||| ||||| | | | || | || || | ||| || ||| ||| || Sbjct 16664 GTCAGCCTTGCGTTTGATGCAGGGAATGGTTTCAACAGCGTCGAACAGGAAGTCGCGTTG 16605 Query 869419 GGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || || || |||| || |||||||| ||||| || ||||| || Sbjct 16604 AGCGGGCTCTTTGATGTACGTGTCGATGAGGAGAGAGTAGGTTTC 16560 >seq178594 Length=29560 Score = 87.8 bits (96), Expect = 2e-11 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||||||||||||||| | || || || || ||||||||||||||||||||| | | Sbjct 5403 TCCACAGTGCGTAAAACAAATCACGAGCGCGAGACTCCTCCTTGCCGTGGTTCTTCCTCA 5462 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 | ||||| | |||| || || || ||||| ||||| |||||| ||| || || || Sbjct 5463 GATCGAGGAACTCGAAAACATCCGCATGCCATGGCTCGAGGTAGATGGCGAAAGCTCCGG 5522 Query 1628585 TGCGCTTGCCGCCGCC 1628600 |||||| ||| || Sbjct 5523 GACGCTTGTTGCCACC 5538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6092163298064013