Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq181137 118 1e-21 >seq181137 Length=58212 Score = 118 bits (130), Expect = 1e-21 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || ||||| || || || | | Sbjct 1613 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGCTGGAGGTGGAGTCTTCG 1554 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || ||||| ||||| Sbjct 1553 GACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCAG 1494 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| |||||||| ||| |||||||| | | | | || |||||||| Sbjct 1493 CAACGTCTCATCTTCGCCGGGAAGCAGTTGGAGGATGGTCGTACCCTTTCGGATTATAAT 1434 Query 24884 ATTCAAAAGGAATCGACACTACACTTGG 24911 || || ||||| ||||| || || |||| Sbjct 1433 ATCCAGAAGGAGTCGACTCTTCATTTGG 1406 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || ||||| || || || | Sbjct 1841 ATGCAGATCTTCGTCAAGACCCTCACAGGGAAGACGATCACCCTCGAGGTGGAGTCCTCT 1782 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || || || || || || || ||| Sbjct 1781 GACACCATCGATAATGTGAAGGCGAAGATCCAGGATAAGGAGGGCATCCCCCCAGACCAA 1722 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| ||||| || ||||| || ||| | | | | || ||||| ||| Sbjct 1721 CAACGTCTTATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACCCTTTCTGATTACAAC 1662 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 ||||| || || ||||| || || Sbjct 1661 ATTCAGAAAGAGTCGACTCTCCA 1639 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| |||| || || || || || || || || || || || || | | Sbjct 2069 ATGCAGATCTTTGTTAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTGGAGTCTTCG 2010 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| |||||| |||||||| || || || || || || || Sbjct 2009 GATACCATTGACAACGTGAAAGCAAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAG 1950 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||||||||| ||||| || || | | | | || || || ||| Sbjct 1949 CAGCGTCTTATCTTTGCCGGGAAGCAGCTCGAAGACGGCCGTACCTTATCCGACTACAAC 1890 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 || || ||||| || || || || Sbjct 1889 ATCCAGAAGGAGTCTACCCTTCA 1867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448871332960920