Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq181137 109 5e-19 seq174905 107 2e-18 seq178594 84.2 2e-11 >seq181137 Length=58212 Score = 109 bits (120), Expect = 5e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || |||||||| | ||| | | | || |||||||||||||| Sbjct 1645 GTCGACTCTTTCTGAATGTTGTAATCAGAAAGGGTGCGGCCA-TCTTCGAGCTGCTTGCC 1703 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || || || ||||| || |||||||| ||||| || |||||| ||| Sbjct 1704 GGCGAAGATAAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTCGCCTT 1763 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| | || |||||| |||| ||||| || || || || || || Sbjct 1764 CACATTATCGATGGTGTCAGAGGACTCCACCTCGAGGGTGATCGTCTTCCCTGTGAGGGT 1823 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 1824 CTTGACGAAGATCTGCATG 1842 Score = 104 bits (114), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGA 133512 ||||| | || ||||| ||||| ||||| ||||| | | | | |||| ||||| | Sbjct 1408 AAATGAAGAGTCGACTCCTTCTGGATATTATAATC--CGAAAGGGTACGACCATCCTCCA 1465 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||||| || ||| | ||||| || ||||| || ||||| |||||||||||||| || Sbjct 1466 ACTGCTTCCCGGCGAAGATGAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGA 1525 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||| | | || | ||||| | | |||||| || | |||| || |||| Sbjct 1526 TCTTCGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATCGTCTTGC 1585 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || || ||||| |||||||| Sbjct 1586 CCGTGAGGGTCTTGACGAAGATCTGCAT 1613 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/207 (70%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGC 133514 ||| | ||| ||||| ||||| || ||||| ||| | || ||| ||| |||||| Sbjct 1866 ATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGATAAGGT--ACGGCCGTCTTCGAGC 1923 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || || ||||||||||| || || || || |||||||| ||| Sbjct 1924 TGCTTCCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGAATC 1983 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 ||| || | | |||| || || | | |||||| || | |||| ||| ||||| Sbjct 1984 TTTGCTTTCACGTTGTCAATGGTATCCGAAGACTCCACCTCAAGAGTGATGGTCTTGCCC 2043 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || || || || ||||||||| Sbjct 2044 GTGAGGGTCTTAACAAAGATCTGCATG 2070 >seq174905 Length=21728 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 ||||| || ||||| ||||||| ||||| ||||| || ||||||||| || ||| Sbjct 16864 AGGCAGGCGAAGTCGGTGTGCATACCCTCATCGCGACTGATGAGCTCGTTGGAGAAGGTC 16805 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 | ||||||||| || || | |||| || |||| |||| || || || |||||| Sbjct 16804 AAGCCGGGCATCATTCCACGCTTCTTCATCCAGAAGATGGATGCGAACGACCCAGAAAAG 16745 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTG 120819 || | ||||| ||| |||||||||||| | ||| || | || || | ||| | | Sbjct 16744 AAAATCCCCTCAACGGCGGCAAAGGCGACAAGGCGTTCACCGAAAGTGGAACTCTGGTCG 16685 Query 120820 TCGATCCACTTCATGGCCCACTCGGCCTT 120848 ||||||||| | |||||| || ||||| Sbjct 16684 GAGATCCACTTGAGGGCCCAGTCAGCCTT 16656 >seq178594 Length=29560 Score = 84.2 bits (92), Expect = 2e-11 Identities = 190/284 (67%), Gaps = 4/284 (1%) Strand=Plus/Plus Query 148644 TCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCG 148703 || |||||||| || || || | || ||||| || || ||||||||| | || || Sbjct 4759 TCAGCAAGGCCTTGAACACCGAGTCCGATGGGGCGATGGCGCATGTTGGAGCGACGAGCT 4818 Query 148704 CTCTCGAGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTT 148763 || || |||| ||| ||||||||| || ||| ||| | | || ||||| Sbjct 4819 TCGGGGATAGGGTAGTAGTTCACGTCGATGATGCGGTTAAGGTTGAACGCTACGACCTTG 4878 Query 148764 GTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCATCGGTT--CACGG 148821 || | | || || || ||||||||| | || ||||| | ||| || | Sbjct 4879 CAAACATCGTGGAGTTTTTGGAAGTCGTACTTGCCGTCAACGATAAA--GGTAGGCAGAG 4936 Query 148822 CGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGG 148881 ||| |||||| || ||||||||||| ||||| ||||||| | ||| || | |||||||| Sbjct 4937 CGAGAGAGGCAAGGTTGCACACGGCAGTCTCCTCCGGGGAGGAGTATTCAATGATCTCGG 4996 Query 148882 CGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTG 148925 || |||||| | ||||| |||| ||||| || ||| Sbjct 4997 TACAGAGATTGGATGACTTGATAGTACCCAGGTTCTGCTGGTTG 5040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482318062770360