Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq181137 93.3 3e-14 >seq181137 Length=58212 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | || | ||| || || ||| || || |||||||| ||||| Sbjct 1843 CCACCACGCAGACGGAGGACGAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAT 1902 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || || |||| || | || || |||||||| || | ||||||||| ||| | || Sbjct 1903 AAGGTACGGCCGTCTTCGAGCTGCTTCCCGGCAAAGATAAGACGCTGCTGGTCTGGGGGA 1962 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||| || ||||| ||| || ||||| | | |||| ||| || || ||||| Sbjct 1963 ATACCCTCCTTGTCTTGAATCTTTGCTTTCA-CGTTGTCAATGGTATCCGAAGACTCCAC 2021 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || | || || |||||||||||||| Sbjct 2022 CTCAAGAGTGATGGTCTTGCCCGTGAGGGTCTTAACAAAGATCTGCAT 2069 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 33542 CCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCA 33601 ||||||| ||||| ||| || || || || ||||| || || || || | || |||| Sbjct 1406 CCAAATGAAGAGTCGACTCCTTCTGGATATTATAATCCGAAAGGGTACGACCATCCTCCA 1465 Query 33602 ATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAA 33661 | || || ||||| || || | ||| |||||||| | || | ||||| ||||| | Sbjct 1466 ACTGCTTCCCGGCGAAGATGAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGA 1525 Query 33662 TTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTA 33720 | ||| |||| | | ||| | |||||| || ||||| || | ||||||||| || Sbjct 1526 TCTTCGCCTTCA-CGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATCGTCTTG 1584 Query 33721 CCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | || || || ||||||||||| Sbjct 1585 CCCGTGAGGGTCTTGACGAAGATCTGCAT 1613 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | || | ||| ||||| |||||| || ||||||||||| || Sbjct 1615 CCACCACGCAGACGAAGGACGAGATGGAGAGTCGACTCTTTCTGAATGTTGTAATCAGAA 1674 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || || | || || ||||| || || | ||| || || ||| | || Sbjct 1675 AGGGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATAAGACGTTGTTGGTCTGGGGGG 1734 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || || || || ||| ||| |||| || | |||||| || ||||| Sbjct 1735 ATGCCCTCCTTATCCTGGATCTTCGCCTTC-ACATTATCGATGGTGTCAGAGGACTCCAC 1793 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | |||||||| || ||||| | || || || ||||||||||| Sbjct 1794 CTCGAGGGTGATCGTCTTCCCTGTGAGGGTCTTGACGAAGATCTGCAT 1841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 327972934466880