Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq174905 141 1e-27 >seq174905 Length=21728 Score = 141 bits (156), Expect = 1e-27 Identities = 307/449 (68%), Gaps = 9/449 (2%) Strand=Plus/Plus Query 1455864 CTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGA 1455923 |||| |||| |||||||||| ||||| ||||| ||||| ||| ||||| || || Sbjct 16395 CTGAACGACAACGAGCGCCACTTCATTTCACACGTTCTCGC-TTTCTTCGCGGCGTCTGA 16453 Query 1455924 TGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGC 1455983 || ||||| || ||||| || ||||| || || ||| | ||||| Sbjct 16454 CGGTATCGTCAATGAAAACCTTCTCGAACGCTTCTCCGGTGAAGTACAAGCCGCCGAGGC 16513 Query 1455984 ACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCT 1456043 |||| || || || |||||||| || |||||||||||||| ||||||||||| || Sbjct 16514 TCGTTGCTTCTATGGCTTCCAGATTATGATGGAAAACATCCACTCCGAAACCTACTCTCT 16573 Query 1456044 CCTGATCGACACCTACGTCAAGGA-CCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCG 1456102 ||| |||||||| ||| |||| || |||| || | ||| ||| || ||| | | Sbjct 16574 CCTCATCGACACGTACATCAAAGAGCCCGCTC-AACGCGACTTCCTGTTCGACGCTGTTG 16632 Query 1456103 ACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGG 1456162 | || | || | | | ||||| |||||||| | ||||||||| | | || Sbjct 16633 AAACCATTCCCTGCATCAAACGCAAGGCTGACTGGGCCCTCAAGTGGATCTCCGACCAGA 16692 Query 1456163 GCCTCGACACTTT-GCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCT 1456220 | || |||||| | || || || |||| |||||||| ||| ||||| || || || | Sbjct 16693 G-TTC--CACTTTCGGTGAACGCCTTGTCGCCTTTGCCGCCGTTGAGGGGATTTTCTTTT 16749 Query 1456221 CGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGC 1456280 | || ||| ||||||| ||| | |||||||| || | |||||||| ||| | Sbjct 16750 CTGGGTCGTTCGCATCCATCTTCTGGATGAAGAAGCGTGGAATGATGCCCGG-CTTGACC 16808 Query 1456281 TTTAGCAACGAATTTATCAGTCGCGACGA 1456309 || |||||| | ||||||||||| || Sbjct 16809 TTCTCCAACGAGCTCATCAGTCGCGATGA 16837 Score = 131 bits (144), Expect = 2e-24 Identities = 275/405 (68%), Gaps = 4/405 (1%) Strand=Plus/Minus Query 1455869 CGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCA 1455928 |||| |||| |||||||| || ||| |||| ||||| ||| ||||| || || | Sbjct 15131 CGACAACGAACGCCATTTTATTTCACACATCCTTGCCTTCTTT-GCCGCTTCTGACGGTA 15073 Query 1455929 TCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTT 1455988 |||| || || || | || || || || || ||| | | || ||||| | Sbjct 15072 TCGTCAATGAAAATCTTGTTCAACGTTTCTCCAACGAAGTACAAGTCGCCGAAGCACGCT 15013 Query 1455989 TGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGA 1456048 || || ||||| || || || || ||| ||||| | || ||||| || || || | Sbjct 15012 GTTTCTATGGGTTTCAAATTATGATGGAGAACGTCCACGCAGAGACCTATTCCCTTCTCA 14953 Query 1456049 TCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGG 1456108 ||||||||||| |||||||||| | | || | || ||| |||||| || || Sbjct 14952 TCGACACCTACATCAAGGACCCAAATCAAAGAGAGTATCTATTTGACGCCATAGAGACAA 14893 Query 1456109 TGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCG 1456168 | || | | | | ||||| || ||||| | |||||||| | || || ||| Sbjct 14892 TTCCTTGCATCAAGCGCAAGGCTGAATGGGCCCTCAAGTGGATATCTGACGAAGG-CTCC 14834 Query 1456169 ACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAG 1456227 ||| ||||| ||||| || |||| |||||||| ||||| |||||||| ||||| ||| Sbjct 14833 ACA-TTTGCTGAGCGTCTAGTCGCTTTTGCCGCGGTCGAAGGCATCTTCTTCTCTGGCTC 14775 Query 1456228 TTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGG 1456272 ||| | || |||||| | |||||||| || |||||||| || Sbjct 14774 GTTCGCTTCAATATTTTGGATAAAGAAGCGGGGGCTCATGCCTGG 14730 Score = 100 bits (110), Expect = 4e-15 Identities = 120/159 (75%), Gaps = 3/159 (2%) Strand=Plus/Plus Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 |||||||||||||| || | |||||||||||||||||| || || || |||||||| | Sbjct 17024 CTCATCGGCATGAATGCTAA-GCTCATGTGCCAGTACATCGAGTTC-GTTGCCGACCGTC 17081 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||| | | || ||| | | ||| |||| | ||||||| ||| | ||| Sbjct 17082 TGCTTGTATCTCTGGGCAATG-ACAAGGTCTACAACTCCACCAACCCCTTCGACTTCATG 17140 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 || ||||||||||| |||||||||||||||| |||||| Sbjct 17141 GACATGATCTCGCTCCAGGGCAAGACCAACTTCTTCGAG 17179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7160209800535218