Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq174905 98.7 3e-15 >seq174905 Length=21728 Score = 98.7 bits (108), Expect = 3e-15 Identities = 122/166 (73%), Gaps = 1/166 (1%) Strand=Plus/Plus Query 443700 TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTT 443759 |||| || || || ||||| ||||| | || || || | || ||| || | || Sbjct 16701 TTCGGTGAACGCCTTGTCGCCTTTGCCGCCGTTGAGGGGATTTTCTTTTCTGGGT-CGTT 16759 Query 443760 AGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGA 443819 || |||||||||||| |||| ||||||||| | |||| ||| ||||||| ||||| Sbjct 16760 CGCATCCATCTTCTGGATGAAGAAGCGTGGAATGATGCCCGGCTTGACCTTCTCCAACGA 16819 Query 443820 ACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTT 443865 || |||||||| || |||||| |||| |||||||||||| ||| Sbjct 16820 GCTCATCAGTCGCGATGAGGGTATGCACACCGACTTCGCCTGCCTT 16865 Score = 87.8 bits (96), Expect = 6e-12 Identities = 121/168 (72%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 443706 GAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTC 443765 ||||| |||||||||||||| | ||||||||| | || || ||| | || || || Sbjct 14824 GAGCGTCTAGTCGCTTTTGCCGCGGTCGAAGGCATCTTCTTCTCTGGC-TCGTTCGCTTC 14766 Query 443766 CATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGAT 443825 || || ||| | || ||||| || || |||| || | || ||| || ||||| || Sbjct 14765 AATATTTTGGATAAAGAAGCGGGGGCTCATGCCTGGCTTAACATTTTCAAATGAACTCAT 14706 Query 443826 CAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACAC 443873 ||| || || ||||| ||||| ||| |||||||| || || ||||| Sbjct 14705 CAGCCGAGATGAGGGAATGCATACCGATTTCGCCTGCCTCCTATACAC 14658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1584622247568605