Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq178594 89.7 6e-13 seq174905 89.7 6e-13 >seq178594 Length=29560 Score = 89.7 bits (98), Expect = 6e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 111878 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 111937 ||||| | |||||||| | ||| ||||| ||||| || || |||||||| || Sbjct 5752 AGAGTATCGTAGATACCATCGATGGAGTCATCCTTCATGCAGACTAGGAAGCAGGAAGAG 5811 Query 111938 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 111997 | ||||| ||||||||||| ||||| ||||| || | ||||| |||| || | Sbjct 5812 AGTTGCGGATGGGGTGTACCAGCGTTGAACAGGGTAGGCGAGGCGTGTGTGAAGTAACGT 5871 Query 111998 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATT 112057 | ||||| || ||| ||||| | |||| || || || || |||||||| || | Sbjct 5872 TCTGACATGAGGTTGTAGGTCTCAAGGACATGGTCGATATCATCGCCGTGGATACCAACG 5931 Query 112058 GCGACCCGCATGAACAT 112074 || || ||||||| ||| Sbjct 5932 GCCACACGCATGATCAT 5948 >seq174905 Length=21728 Score = 89.7 bits (98), Expect = 6e-13 Identities = 325/503 (65%), Gaps = 7/503 (1%) Strand=Plus/Plus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 |||||||||||| || ||||||||||| || || || |||||||| ||||||||| Sbjct 14691 CCCTCATCTCGGCTGATGAGTTCATTTGAAAATGTTAAGCCAGGCATGAGCCCCCGCTTC 14750 Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 || | |||| | || | ||| || || ||||||||||| || || || ||||| Sbjct 14751 TTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAGAAGATGCCTTCGACCGCGGCAAAA 14810 Query 122797 GCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCATTGCCCATTT 122855 || | || || || || || | | ||| ||| | || | ||| || | ||||||| Sbjct 14811 GCGACTAGACGCTCAGCAAATGTG-GAGCCTTCGTCAGATATCCACTTGAGGGCCCATTC 14869 Query 122856 CGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTTTTCAGA 122915 ||||| || || || || | || | ||||| ||||||| | || ||| | Sbjct 14870 AGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCGTCAAATAGATACTCTCTTTGATT 14929 Query 122916 TCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCAT-TTCAT 122974 | ||||| ||||| |||| || | ||||| || || | || || | | ||| Sbjct 14930 TGGGTCCTTGATGTAGGTGTCGATGAGAAGGGAATAGGTCTCTGCGTGGACGTTCTCCAT 14989 Query 122975 TATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCCGCAAAAT 123034 || |||| | | ||||| |||| |||||| | || || || | | ||| Sbjct 14990 CAT-AATTTGAAACCCATAGAAACAGCGTGCTTCGGCGACTTGTACTTCGTTGGAGAAAC 15048 Query 123035 TGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGGATGTACT 123094 | | | ||| ||| || || || || || | |||||||| || ||||||| Sbjct 15049 GTTGAACAAGATTTTCATTGACGATACCGTCAGAAGCGGCAAAGAAGGCAAGGATGTGTG 15108 Query 123095 TTATGAATTTCTTTTCATTTTCATTCAG---GGTCTTCCAGTCGTCAAGATCTTTGGACA 123151 || || | ||| || || || || | | |||||||| || || | || | Sbjct 15109 AAATAAAATGGCGTTCGTTGTCGTTTAGATTGTTGTTCCAGTCCATTAGGTCGTGAGATA 15168 Query 123152 AATCAACTTCTTCCGCAGTCCAA 123174 |||| | |||||| ||||||||| Sbjct 15169 AATCCAGTTCTTCAGCAGTCCAA 15191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626599388354400