Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq174905 118 1e-21 seq178594 93.3 5e-14 >seq174905 Length=21728 Score = 118 bits (130), Expect = 1e-21 Identities = 336/505 (67%), Gaps = 11/505 (2%) Strand=Plus/Plus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 ||||| || ||| |||||||||||| || || | || |||||||| ||||||||| Sbjct 14691 CCCTCATCTCGGCTGATGAGTTCATTTGAAAATGTTAAGCCAGGCATGAGCCCCCGCTTC 14750 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || | ||| || || | | || ||||||||||||||||| || || || || || Sbjct 14751 TTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAGAAGATGCCTTCGACCGCGGCAAAA 14810 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCGCCCACTG 130212 || | |||||||||||||| | | | | ||| || | | |||||| | ||||| | Sbjct 14811 GCGACTAGACGCTCAGCAAATGTG-GAGCCTTCGTCAGATATCCACTTGAGGGCCCATTC 14869 Query 130213 CGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT-TCTTTTCTG 130271 ||||| || ||| || || | |||| || || ||||| || | || ||||| | Sbjct 14870 AGCCTTGCGCTTGATGCAAGGAATTGTCTCTATGGCGTCAAATAGATACTCTCTTTGAT- 14928 Query 130272 ATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCAT-TTCA 130330 ||| || |||||||| | || ||||| ||||| || || | ||||| | | || Sbjct 14929 TTGGGTCCTTGATGTAGGTGTCGATGAGAAGGGAATAGGTCTCTGCGTGGACGTTCTCCA 14988 Query 130331 TTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCTGCAAAA 130390 | || ||| || | |||||| |||| |||||| | ||||| || | || | || Sbjct 14989 TCAT-AATTTGAAACCCATAGAAACAGCGTGCTTCGGCGACTTGTACTTCGT-TGGAGAA 15046 Query 130391 TTGTT-ATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATATA 130449 ||| | | ||| ||| || || || || || | ||||| || || ||||| | Sbjct 15047 ACGTTGAACAAGATTTTCATTGACGATACCGTCAGAAGCGGCAAAGAAGGCAAGGATGTG 15106 Query 130450 CTTTATGAATTTCTGTTCATTCTCGTTCAG---GGTCTTCCAGTCGTCAAGATCCTTCGA 130506 || || | |||| || ||||| || | | |||||||| || || | || Sbjct 15107 TGAAATAAAATGGCGTTCGTTGTCGTTTAGATTGTTGTTCCAGTCCATTAGGTCGTGAGA 15166 Query 130507 GAGATCTACCTCCTCCGCAGTCCAA 130531 | ||| | || || ||||||||| Sbjct 15167 TAAATCCAGTTCTTCAGCAGTCCAA 15191 >seq178594 Length=29560 Score = 93.3 bits (102), Expect = 5e-14 Identities = 181/266 (68%), Gaps = 1/266 (0%) Strand=Plus/Plus Query 119297 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 119356 |||||||| || || ||||| || || ||| || ||||| | ||||| | Sbjct 5697 GTGGATGTTCAATCCGATACCACCGGCAGTCTTGCTAATCATGGCGCAGCTCTTGAGAGT 5756 Query 119357 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 119416 ||||||| |||||||| |||||| |||| | || ||||||||| || | ||| Sbjct 5757 ATCGTAGATACCATCGATGGAGTCATCCTTCATGCAGACTAGGAAGCAGGAAGAGAGTTG 5816 Query 119417 AGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGA 119476 || |||||||||||||||||| || || || | ||||| |||| || || || Sbjct 5817 CGGATGGGGTGTACCAGCGTTGAACAGGGTAGGCGAGGCGTGTGTGAAGTAACGTTCTGA 5876 Query 119477 CATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGAC 119536 ||| || ||||||||| | ||| | || || || ||||| ||||| | | || Sbjct 5877 CATGAGGTTGTAGGTCTCAAGGACATGGTCGATATCATCGCCGTGGATACCAACGGCCAC 5936 Query 119537 CCGCATAAACATGTATTG-GGGTGTT 119561 ||||| | ||| | ||| ||| ||| Sbjct 5937 ACGCATGATCATATGTTGAGGGCGTT 5962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617024479734840