Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq178594 95.1 1e-14 >seq178594 Length=29560 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290 ||| ||||||| |||||| | ||||| || || || || || || |||| | ||||| Sbjct 5948 ATGATCATGCGTGTGGCCGTTGGTATCCACGGCGATGATATCGACCATGTCCTTGAGACC 5889 Query 104291 TACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGT 104350 ||| || ||||| || || |||| ||||| | || ||||| ||||| |||||| Sbjct 5888 TACAACCTCATGTCAGAACGTTACTTCACACACGCCTCGCCTACCCTGTTCAACGCTGGT 5829 Query 104351 ACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAAC 104410 ||||| || ||| | || |||||||| || || ||||| ||||| ||| | Sbjct 5828 ACACCCCATCCGCAACTCTCTTCCTGCTTCCTAGTCTGCATGAAGGATGACTCCATCGAT 5769 Query 104411 GGTATCTATGGAACTCT 104427 |||||||| | ||||| Sbjct 5768 GGTATCTACGATACTCT 5752 Score = 84.2 bits (92), Expect = 3e-11 Identities = 155/227 (68%), Gaps = 9/227 (4%) Strand=Plus/Minus Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 ||||| |||||| | || | || || |||| ||||| || | | | | ||||| || Sbjct 5613 GGGACCAATGGTTATTCCAACGGAATCGTTCCTATGCTCCGAGCCTATGATGCCACCGCT 5554 Query 104573 CGCTATGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAG 104626 || ||||| |||||| ||| ||||| ||| || |||| |||| || ||| Sbjct 5553 CGTTATGTTGATCAAGGTGGCAACAAGCGTCCC---GGAGCTTTCGCCATCTACCTCGAG 5497 Query 104627 CCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAG 104686 |||||||| |||||| | | |||||||| || || | ||||| || | |||||| Sbjct 5496 CCATGGCATGCGGATGTTTTCGAGTTCCTCGATCTGAGGAAGAACCACGGCAAGGAGGAG 5437 Query 104687 GCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTT 104733 | || || ||| | || | ||| || |||||||| ||||| || Sbjct 5436 TCTCGCGCTCGTGATTTGTTTTACGCACTGTGGATTCCTGATCTTTT 5390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581930316498360