Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq181137 136 1e-26 seq174905 86.0 2e-11 seq176983 84.2 7e-11 >seq181137 Length=58212 Score = 136 bits (150), Expect = 1e-26 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 140534 ATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTG 140593 ||||||||| ||||| || || ||||||||||| || | || || ||||| || | || Sbjct 1410 ATGAAGAGTCGACTCCTTCTGGATATTATAATCCGAAAGGGTACGACCATCCTCCAACTG 1469 Query 140594 TTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTT 140653 || || || ||||| ||||||||||||||||||||||| ||||| || ||||| || || Sbjct 1470 CTTCCCGGCGAAGATGAGACGTTGCTGATCAGGAGGAATGCCTTCCTTGTCCTGGATCTT 1529 Query 140654 AGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713 || || || || || || | || || | || || || || || | ||||| || || Sbjct 1530 CGCCTTCACGTTGTCGATGGTGTCCGAAGACTCCACCTCCAGCGTGATCGTCTTGCCCGT 1589 Query 140714 TAGTGTTTTTACAAAAATCTGCATT 140738 || || || || || ||||||||| Sbjct 1590 GAGGGTCTTGACGAAGATCTGCATT 1614 >seq174905 Length=21728 Score = 86.0 bits (94), Expect = 2e-11 Identities = 151/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 223703 GCAAATTCTGTATGTAATGCCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCA 223762 || || || ||||| | | ||||||||| || | |||||||||||||||||| ||| Sbjct 14673 GCGAAATCGGTATGCATTCCCTCATCTCGGCTGATGAGTTCATTTGAAAATGTTAAGCCA 14732 Query 223763 GGCATTAAACCTCTCTTTTTCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATA 223822 ||||| | || | ||| || ||||||||||||| || | || || || || || Sbjct 14733 GGCATGAGCCCCCGCTTCTTTATCCAAAATATTGAAGCGAACGAGCCAGAGAAGAAGATG 14792 Query 223823 CCTTCTACACAAGCAAACGCTACTAATCGTGTTGCAAAATTTGAATCTTTGTCTCCTATC 223882 ||||| || ||||| || |||| || ||||| | || ||| ||| |||| Sbjct 14793 CCTTCGACCGCGGCAAAAGCGACTAGACGCTCAGCAAATGTGGAGCCTTCGTCAGATATC 14852 Query 223883 CATTTTAATGCCCAATCTGCTTTTTTCTTAATACAAGAAA 223922 || || | ||||| || || || ||| || |||| || Sbjct 14853 CACTTGAGGGCCCATTCAGCCTTGCGCTTGATGCAAGGAA 14892 >seq176983 Length=31581 Score = 84.2 bits (92), Expect = 7e-11 Identities = 175/260 (67%), Gaps = 3/260 (1%) Strand=Plus/Plus Query 349634 TTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTT 349693 || || || ||||||||| || ||||||||||| || | ||| || || | || || Sbjct 7171 TTCAACGACGCCCAGCGTCAAGCTACAAAAGATGCGGGTACCATAGCCGGCCTCAACGTC 7230 Query 349694 CTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGT 349753 || | | || |||||||| || || || || |||| ||||| || || |||| | Sbjct 7231 CTTCGCGTCATGAATGAACCAACCGCCGCCGCTCTTGCCTATGGTCTCGACAAAAAAGGC 7290 Query 349754 GACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTA 349813 | | ||| || || | | | ||| | || ||||| || || || || ||| || Sbjct 7291 GCC---GAATCCAAGATCATCGTGTACGATCTCGGAGGTGGAACATTCGACGTGTCATTA 7347 Query 349814 CTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGT 349873 || | | || || || |||| || || ||||||||||| ||||| || || || Sbjct 7348 CTCTCCATCGAGGACGGTGTTTTCGAGGTCCTGGCAACTGCTGGAGATACGCACCTCGGA 7407 Query 349874 GGAGAAGATTTTGATAATCG 349893 |||||||| || || || || Sbjct 7408 GGAGAAGACTTCGACAACCG 7427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1511711522603667