Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq178594 111 2e-19 seq174905 89.7 6e-13 >seq178594 Length=29560 Score = 111 bits (122), Expect = 2e-19 Identities = 151/207 (73%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||| || || || || ||||| ||||| || || | |||| ||||| ||| Sbjct 5944 TCATGCGTGTGGCCGTTGGTATCCACGGCGATGATATCGACCATGTCCTTGAGACCTACA 5885 Query 19176 ACCTGATGAGCCAGAA-GTT-CTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTAC 19233 |||| ||| ||||| ||| |||||| ||||| |||| ||||| |||||||| ||||| Sbjct 5884 ACCTCATGT--CAGAACGTTACTTCACACACGCCTCGCCTACCCTGTTCAACGCTGGTAC 5827 Query 19234 GAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGG 19293 | | ||||| | || ||| |||||||| |||||||||||| ||| || || Sbjct 5826 ACCCCATCCGCAACTCTCTTCCTGCTTCCTAGTCTGCATGAAGGATGACTCCATCGATGG 5767 Query 19294 CATCTACGAGACGCTCAAGGAGTGCGC 19320 |||||||| || |||||| ||||| Sbjct 5766 TATCTACGATACTCTCAAGAGCTGCGC 5740 Score = 107 bits (118), Expect = 2e-18 Identities = 149/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 79684 GCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGG 79743 ||||| |||||| || |||||||| || ||||| ||||| |||||||| ||| ||| Sbjct 5740 GCGCAGCTCTTGAGAGTATCGTAGATACCATCGATGGAGTCATCCTTCATGCAGACTAGG 5799 Query 79744 AAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGC 79803 |||||| || | || || | | ||||| |||||||| ||||| |||| ||||| Sbjct 5800 AAGCAGGAAGAGAGTTGCGGATGGGGTGTACCAGCGTTGAACAGGGTAGGCGAGGCGTGT 5859 Query 79804 GTGAAG-AACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCC 79862 |||||| ||| || | ||| || | ||| ||||| ||| | || || ||||| Sbjct 5860 GTGAAGTAACGTTCTGA-CATGAGGTTGTAGGTCTCAAGGACATGGTCGATATCATCGCC 5918 Query 79863 GTGGATGCCGACCGCGACGCGCATGA 79888 |||||| || || || || ||||||| Sbjct 5919 GTGGATACCAACGGCCACACGCATGA 5944 Score = 84.2 bits (92), Expect = 2e-11 Identities = 245/376 (65%), Gaps = 6/376 (2%) Strand=Plus/Minus Query 19841 GCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTACTGAAATC 19900 ||||| || || ||| ||||| | || | |||||||| ||||| || ||||| || ||| Sbjct 5048 GCCAAATCCAACCAGCAGAACCTGGGTACTATCAAGTCATCCAATCTCTGTACCGAGATC 4989 Query 19901 ATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTGCCTGCCG 19960 || || ||| ||||| |||||||||||||| || || || || || ||||| Sbjct 4988 ATTGAATACTCCTCCCCGGAGGAGACTGCCGTGTGCAACCTTGCCTCTCTCGCTCTGCCT 4929 Query 19961 ACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTC 20020 || || || | | | | |||||| ||| | |||| || | |||||| Sbjct 4928 ACCTTTATCGTTGACGGCAAGTACGACTTCCAAAAACTCCACGATGTTTGCAAGGTCGTA 4869 Query 20021 ACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTACCCGA---CCGAGGCGGCGCGC 20077 || || || || ||| ||||||| ||||| ||||| | |||| || ||| Sbjct 4868 GCGTTCAACCTTAACCGCATCATCGACGTGAACTACTACCCTATCCCCGAAGCTCGTCGC 4809 Query 20078 AAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTC 20137 || || |||||||| || || |||| |||| || || ||||| || || ||| Sbjct 4808 ---TCCAACATGCGCCATCGCCCCATCGGACTCGGTGTTCAAGGCCTTGCTGATACCTTC 4752 Query 20138 ATGATGCTCGGCCTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTC 20197 ||| ||| | | | |||||| ||| | || | ||| |||| |||||| Sbjct 4751 ATGGCCCTCCACATGCCCTTCGACTCGCCCGAAGCCAAGGCGCTGAACATTCAGATCTTC 4692 Query 20198 GAGGCCGTGTACCACG 20213 || || |||| |||| Sbjct 4691 GAAACCATGTATCACG 4676 Score = 82.4 bits (90), Expect = 8e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 19410 CCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGG 19469 || |||| ||||| || |||||||| | || | ||| || | || || | || | Sbjct 5597 CCAACGGAATCGTTCCTATGCTCCGAGCCTATGATGCCACCGCTCGTTATGTTGATCAAG 5538 Query 19470 GGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCA 19529 | ||| ||| || || | |||||||||||||||||||||||||| ||||| || Sbjct 5537 GTGGCAACAAGCGTCCCGGAGCTTTCGCCATCTACCTCGAGCCATGGCATGCGGATGTTT 5478 Query 19530 TGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCT 19589 | || |||||||| ||| | |||||| || | |||||| ||| ||| || | | Sbjct 5477 TCGAGTTCCTCGATCTGAGGAAGAACCACGGCAAGGAGGAGTCTCGCGCTCGTGATTTGT 5418 Query 19590 TCACGGCCTTGTGGATTCCGGACCTATT 19617 | || |||||||||| || || || Sbjct 5417 TTTACGCACTGTGGATTCCTGATCTTTT 5390 >seq174905 Length=21728 Score = 89.7 bits (98), Expect = 6e-13 Identities = 272/415 (66%), Gaps = 9/415 (2%) Strand=Plus/Minus Query 59704 TCCTGGCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTT 59763 |||| |||||||| || || ||| || || || | |||||| | | | ||| ||| Sbjct 15102 TCCTTGCCTTCTTTGCCGCTTCTGACGGTATCGTCAATGAAAATCTTGT--TCAACGTTT 15045 Query 59764 C--CAAGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGA 59821 | ||| || || || | ||||| || || | ||||| | || ||| | | || Sbjct 15044 CTCCAACGAAGTACAAGTCGCCGAAGCACGCTGTTTCTATGGGTTTCAAATTATGATGGA 14985 Query 59822 GTCTATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGA 59881 | ||||| | ||||| || || || | ||||| | | ||||||| || | | Sbjct 14984 GAACGTCCACGCAGAGACCTATTCCCTTCTCATCGACACCTACATCAAGGACCCAAATCA 14925 Query 59882 GAAGGCTGGTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAAT 59940 | | ||| || ||||||||||| | || ||| | || | || || |||| Sbjct 14924 AAGAGAGTATCTATTTGACGCCATAGAGACAATTCCTTGCA-TCAAGCGCAAGGCTGAAT 14866 Query 59941 GGGCCATGCAGTGGATGAGTCCTGGAGCATC---ATTTGCACAACGTCTCATAGCTTTTG 59997 ||||| | ||||||| | | || || |||||| | ||||| | ||||||| Sbjct 14865 GGGCCCTCAAGTGGATATCTGACGAAGGCTCCACATTTGCTGAGCGTCTAGTCGCTTTTG 14806 Query 59998 CATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGC 60057 | || ||||| ||||||||||||||||||||| | | || || ||| | || |||| Sbjct 14805 CCGCGGTCGAAGGCATCTTCTTCTCTGGCTCGTTCGCTTCAATATTTTGGATAAAGAAGC 14746 Query 60058 GTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGG 60112 | || |||||||| ||| | | || || || || || || ||| || ||||| Sbjct 14745 GGGGGCTCATGCCTGGCTTAACATTTTCAAATGAACTCATCAGCCGAGATGAGGG 14691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547273553222160