Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Baeospora_20myosura_20[genbank_20GCA_5F001179705.1_202015-07-08] 182,489 sequences; 61,019,048 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq181137 197 2e-45 seq182117 102 9e-17 seq173931 98.7 1e-15 seq178594 96.9 4e-15 seq174905 93.3 5e-14 seq176134 89.7 6e-13 seq179408 82.4 9e-11 seq179407 82.4 9e-11 seq178676 82.4 9e-11 seq149589 82.4 9e-11 >seq181137 Length=58212 Score = 197 bits (218), Expect = 2e-45 Identities = 180/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || || |||||||| || ||||||||||| ||||| Sbjct 2069 ATGCAGATCTTTGTTAAGACCCTCACGGGCAAGACCATCACTCTTGAGGTGGAGTCTTCG 2010 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || |||| || || ||||| ||||||||||| ||||| ||||||||| Sbjct 2009 GATACCATTGACAACGTGAAAGCAAAGATTCAAGACAAGGAGGGTATTCCCCCAGACCAG 1950 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || ||||| || ||||| ||||| || | |||||| || | ||||| || Sbjct 1949 CAGCGTCTTATCTTTGCCGGGAAGCAGCTCGAAGACGGCCGTACCTTATCCGACTACAAC 1890 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || |||||||| ||| | ||||| || ||||| Sbjct 1889 ATCCAGAAGGAGTCTACCCTTCATCTCGTCCTCCGTCTGCGTGGTGG 1843 Score = 163 bits (180), Expect = 3e-35 Identities = 159/205 (78%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| |||||||| || || |||||||| || || || ||||| ||||| Sbjct 1614 AATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGCTGGAGGTGGAGTCTTC 1555 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | || ||||||| || || ||||||||||| || |||||||| || || Sbjct 1554 GGACACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAAGGCATTCCTCCTGATCA 1495 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| ||||| || || || || ||||| | ||||||| ||||||||| | || ||||| Sbjct 1494 GCAACGTCTCATCTTCGCCGGGAAGCAGTTGGAGGATGGTCGTACCCTTTCGGATTATAA 1435 Query 27585 TGTCCAAAAGGAATCCACTCTTCAT 27609 | |||| ||||| || ||||||||| Sbjct 1434 TATCCAGAAGGAGTCGACTCTTCAT 1410 >seq182117 Length=22456 Score = 102 bits (112), Expect = 9e-17 Identities = 212/311 (68%), Gaps = 6/311 (2%) Strand=Plus/Plus Query 31198 ACGGGAATTCCGAAGCTCGACGACGCCAACTGGGCCGGTACCCACAAGTCGCACGAGTGC 31257 |||||| | ||||||||| ||||||||| || || ||| | || | | || || Sbjct 18593 ACGGGATTGCCGAAGCTCTCCGACGCCAATAATGCAGGGACCAAGAACGCTAAGGATTGT 18652 Query 31258 ACGCTTATTATTACCGAGGGTGACTCGGCAAAGGCGCTTGCTATTGCTGGCTTGAGTGTT 31317 || || ||| |||| ||||||||||| || ||||| |||||| | | ||| || |||| Sbjct 18653 ACTCTCATTCTTACTGAGGGTGACTCTGCCAAGGCCCTTGCTGTCGGTGGACTGGGTGTC 18712 Query 31318 GTGGGGCGCAATGCGTTCGGGGTGTTTCCGCTCCGAGGCAAGCCGCGTAACGTTCGTGAC 31377 || || | || || || || || || ||||| || || | || ||||||||||| Sbjct 18713 GTTGGTAGAAACAACTTTGGTGTTTTCCCCCTCCGTGGTAAACTGCTCAACGTTCGTGAG 18772 Query 31378 GCCTCCGTTA--AACAGGTTACGGATAATGAAGAGTTTTCCAACCTGAAAAAGATCCTCG 31435 || || | | ||| | | | | || || ||| || || | || |||||| | | Sbjct 18773 GC--GCGGCACGATCAGATCATGAAGAACGAGGAGATTCAGAATATCAAGAAGATCATGG 18830 Query 31436 GGCTTCAGCATGGCAAGGTATATA-ATTCACTGAGAGAATTGCGGTACGGTCGCCTCATG 31494 | ||||||||| ||||| || | ||| | ||| |||| ||||| || | ||| Sbjct 18831 GTCTTCAGCATAACAAGGAGTACACGAGCACCGCGAG-TCTGCGATACGGACGATTGATG 18889 Query 31495 ATTATGACCGA 31505 |||||||| || Sbjct 18890 ATTATGACTGA 18900 >seq173931 Length=6298 Score = 98.7 bits (108), Expect = 1e-15 Identities = 97/123 (79%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || || || || ||||| ||||| || |||||||| ||||| ||||| |||| ||| || Sbjct 5613 ATCCCCCCCGATCAGCAACGTCTGATCTTTGCTGGAAAGCAGCTCGAAGATGGTCGCACT 5672 Query 27571 CT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGG 27629 || ||| ||||| || |||| ||||| || ||||| || || || ||||||||||| || Sbjct 5673 CTCAGC-GACTACAACATCCAGAAGGAGTCTACTCTCCACCTGGTGTTGCGTCTTCGTGG 5731 Query 27630 TGG 27632 ||| Sbjct 5732 TGG 5734 >seq178594 Length=29560 Score = 96.9 bits (106), Expect = 4e-15 Identities = 198/293 (68%), Gaps = 6/293 (2%) Strand=Plus/Plus Query 80725 TCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCC 80784 ||||| ||||| ||||| |||| |||| ||||| |||||| |||| || || || Sbjct 4759 TCAGCAAGGCCTTGAACACCGAGTCCGATGGGGCGATGGCGCATGTTGGAGCGACGAGCT 4818 Query 80785 TCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGT 80844 || || || ||||| |||| ||||||| |||||| |||||| | || ||| Sbjct 4819 TCGGGGATAGGGTAGTAGTTCACGTCGATGATGCGGTTAAGGTTGAACGCTACGACCTTG 4878 Query 80845 GTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCTTCAC---AAATGCCGGAAGG 80901 |||||| || ||||| || |||||| | | | || | || ||| | || || Sbjct 4879 CAAACATCGTGGAGTTTTTGGAAGTCGTACTTG---CCGTCAACGATAAAGGTAGGCAGA 4935 Query 80902 CTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCC 80961 || || || || ||||||||||| ||| || | | | || | ||| || Sbjct 4936 GCGAGAGAGGCAAGGTTGCACACGGCAGTCTCCTCCGGGGAGGAGTATTCAATGATCTCG 4995 Query 80962 GTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGC 81014 || || | ||| || ||||| || ||||||||||| | |||||| || ||||| Sbjct 4996 GTACAGAGATTGGATGACTTGATAGTACCCAGGTTCTGCTGGTTGGATTTGGC 5048 >seq174905 Length=21728 Score = 93.3 bits (102), Expect = 5e-14 Identities = 133/185 (72%), Gaps = 3/185 (2%) Strand=Plus/Minus Query 64666 AAGGCTGAATGGGCCATCCGGTGGATGAAT--CG-TGGGTCGTCGTTTGGTCAGCGTCTC 64722 ||||||||||||||| || |||||| | || || || | |||| | ||||||| Sbjct 14875 AAGGCTGAATGGGCCCTCAAGTGGATATCTGACGAAGGCTCCACATTTGCTGAGCGTCTA 14816 Query 64723 GCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGG 64782 | ||||||||| || ||||| || ||||| ||||| || ||| ||| || || ||| Sbjct 14815 GTCGCTTTTGCCGCGGTCGAAGGCATCTTCTTCTCTGGCTCGTTCGCTTCAATATTTTGG 14756 Query 64783 CTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGAC 64842 |||| |||||||| || ||||| || | | ||||| || || || ||| || || Sbjct 14755 ATAAAGAAGCGGGGGCTCATGCCTGGCTTAACATTTTCAAATGAACTCATCAGCCGAGAT 14696 Query 64843 GAGGG 64847 ||||| Sbjct 14695 GAGGG 14691 Score = 86.0 bits (94), Expect = 7e-12 Identities = 156/226 (69%), Gaps = 7/226 (3%) Strand=Plus/Plus Query 64666 AAGGCTGAATGGGCCATCCGGTGGATGA---ATCGTGGGTCGTCGTTTGGTCAGCGTCTC 64722 |||||||| |||||| || |||||| | | | || | || ||| | || || Sbjct 16656 AAGGCTGACTGGGCCCTCAAGTGGATCTCCGACCAGAGTTCCACTTTCGGTGAACGCCTT 16715 Query 64723 GCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGG 64782 | || |||||| || || || ||||||||||||||||| ||| || || |||||| Sbjct 16716 GTCGCCTTTGCCGCCGTTGAGGGGATTTTCTTTTCTGGGTCGTTCGCATCCATCTTCTGG 16775 Query 64783 CTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGAC 64842 | || ||||| || ||||||| || || | || || |||||||| ||| ||| || Sbjct 16776 ATGAAGAAGCGTGGAATGATGCCCGGCTTGACCTTCTCCAACGAGCTCATCAGTCGCGAT 16835 Query 64843 GAGGGGCTCCACCAAGAATTTGCGGTTACC--CTGTTCAGCCACCT 64886 ||||| | ||| || || || | || ||||||||||||| Sbjct 16836 GAGGGTATGCACACCGACTT--CGCCTGCCTTTTGTTCAGCCACCT 16879 >seq176134 Length=3119 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| || ||||| ||||| || || || ||||||||||| | Sbjct 2872 ATGCAGATCTTCGTGAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTTGAGTCCTCT 2931 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 |||| ||||| ||| | ||||| || || || ||||||||||| Sbjct 2932 GATACCATTGACAATGTCAAGGCCAAGATCCAAGACAAGGAGGG 2975 >seq179408 Length=3068 Score = 82.4 bits (90), Expect = 9e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || || || |||||||||||||| || || || || ||||| |||||||||| || ||| Sbjct 2973 ATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGAACC 2914 Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 || | |||||||| |||| ||||| |||||| Sbjct 2913 CTGTCGGACTATAACATCCAGAAGGAGTCCACT 2881 >seq179407 Length=3065 Score = 82.4 bits (90), Expect = 9e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || || || |||||||||||||| || || || || ||||| |||||||||| || ||| Sbjct 2970 ATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGAACC 2911 Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 || | |||||||| |||| ||||| |||||| Sbjct 2910 CTGTCGGACTATAACATCCAGAAGGAGTCCACT 2878 >seq178676 Length=5582 Score = 82.4 bits (90), Expect = 9e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || || || |||||||||||||| || || || || ||||| |||||||||| || ||| Sbjct 4579 ATCCCCCCCGACCAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGAACC 4638 Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 || | |||||||| |||| ||||| |||||| Sbjct 4639 CTGTCGGACTATAACATCCAGAAGGAGTCCACT 4671 >seq149589 Length=84 Score = 82.4 bits (90), Expect = 9e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 27502 AAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGAT 27561 |||||||| || ||||| ||||||||||| || || ||||| || ||||| ||||||||| Sbjct 84 AAGGAGGGTATCCCTCCCGACCAGCAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGAT 25 Query 27562 GATCGTACCCTAGCAGACTATAA 27584 | ||| ||||| | ||||| || Sbjct 24 GGTCGCACCCTCTCTGACTACAA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569009457817680